Canan Atilgan
Canan Atilgan
Professor of Materials Science and Nano Enginering, Sabanci University
Verified email at sabanciuniv.edu - Homepage
TitleCited byYear
Small-world communication of residues and significance for protein dynamics
AR Atilgan, P Akan, C Baysal
Biophysical journal 86 (1), 85-91, 2004
3202004
Perturbation-response scanning reveals ligand entry-exit mechanisms of ferric binding protein
C Atilgan, AR Atilgan
PLoS computational biology 5 (10), e1000544, 2009
1062009
Manipulation of conformational change in proteins by single-residue perturbations
C Atilgan, ZN Gerek, SB Ozkan, AR Atilgan
Biophysical journal 99 (3), 933-943, 2010
812010
Noncovalent intramolecular interactions in the monomers and oligomers of the acceptor and donor type of low band gap conducting polymers
AS Ízen, C Atilgan, G Sonmez
The Journal of Physical Chemistry C 111 (44), 16362-16371, 2007
622007
Screened nonbonded interactions in native proteins manipulate optimal paths for robust residue communication
AR Atilgan, D Turgut, C Atilgan
Biophysical journal 92 (9), 3052-3062, 2007
582007
Relaxation kinetics and the glassiness of proteins: the case of bovine pancreatic trypsin inhibitor
C Baysal, AR Atilgan
Biophysical journal 83 (2), 699-705, 2002
432002
Mapping and reverse-mapping of the morphologies for a molecular understanding of the self-assembly of fluorinated block copolymers
G Kacar, C Atilgan, AS Ozen
The Journal of Physical Chemistry C 114 (1), 370-382, 2009
422009
Elucidating the structural mechanisms for biological activity of the chemokine family
C Baysal, AR Atilgan
Proteins: Structure, Function, and Bioinformatics 43 (2), 150-160, 2001
422001
Network-based models as tools hinting at nonevident protein functionality
C Atilgan, OB Okan, AR Atilgan
Annual review of biophysics 41, 205-225, 2012
382012
Consistent picture of the reversible thermal unfolding of hen egg-white lysozyme from experiment and molecular dynamics
F Meersman, C Atilgan, AJ Miles, R Bader, W Shang, A Matagne, ...
Biophysical journal 99 (7), 2255-2263, 2010
372010
Free energy based populations of interconverting microstates of a cyclic peptide lead to the experimental NMR data
C Baysal, H Meirovitch
Biopolymers: Original Research on Biomolecules 50 (3), 329-344, 1999
371999
Coordination topology and stability for the native and binding conformers of chymotrypsin inhibitor 2
C Baysal, AR Atilgan
Proteins: Structure, Function, and Bioinformatics 45 (1), 62-70, 2001
362001
Complete mapping of the morphologies of some linear and graft fluorinated co-oligomers in an aprotic solvent by dissipative particle dynamics
A Sema Ízen, U Sen, C Atilgan
The Journal of chemical physics 124 (6), 064905, 2006
322006
New conformational search method based on local torsional deformations for cyclic molecules, loops in proteins, and dense polymer systems
C Baysal, H Meirovitch
The Journal of chemical physics 105 (17), 7868-7871, 1996
301996
Designing molecular dynamics simulations to shift populations of the conformational states of calmodulin
AO Aykut, AR Atilgan, C Atilgan
PLoS computational biology 9 (12), e1003366, 2013
292013
Relaxation kinetics and the glassiness of native proteins: coupling of timescales
C Baysal, AR Atilgan
Biophysical journal 88 (3), 1570-1576, 2005
292005
Determination of the stable microstates of a peptide from NOE distance constraints and optimization of atomic solvation parameters
C Baysal, H Meirovitch
Journal of the American Chemical Society 120 (4), 800-812, 1998
291998
MD-TASK: a software suite for analyzing molecular dynamics trajectories
DK Brown, DL Penkler, O Sheik Amamuddy, C Ross, AR Atilgan, ...
Bioinformatics 33 (17), 2768-2771, 2017
282017
Efficiency of simulated annealing for peptides with increasing geometrical restrictions
C Baysal, H Meirovitch
Journal of computational chemistry 20 (15), 1659-1670, 1999
281999
Ab initio prediction of the solution structures and populations of a cyclic pentapeptide in DMSO based on an implicit solvation model
C Baysal, H Meirovitch
Biopolymers: Original Research on Biomolecules 53 (5), 423-433, 2000
272000
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