| The Evf-2 noncoding RNA is transcribed from the Dlx-5/6 ultraconserved region and functions as a Dlx-2 transcriptional coactivator J Feng, C Bi, BS Clark, R Mady, P Shah, JD Kohtz Genes & development 20 (11), 1470-1484, 2006 | 858 | 2006 |
| Single-cell RNA-seq analysis of retinal development identifies NFI factors as regulating mitotic exit and late-born cell specification BS Clark, GL Stein-O’Brien, F Shiau, GH Cannon, E Davis-Marcisak, ... Neuron 102 (6), 1111-1126. e5, 2019 | 356 | 2019 |
| Single-cell analysis of human retina identifies evolutionarily conserved and species-specific mechanisms controlling development Y Lu, F Shiau, W Yi, S Lu, Q Wu, JD Pearson, A Kallman, S Zhong, ... Developmental cell 53 (4), 473-491. e9, 2020 | 185 | 2020 |
| Long non-coding RNA-dependent transcriptional regulation in neuronal development and disease BS Clark, S Blackshaw Frontiers in genetics 5, 97168, 2014 | 181 | 2014 |
| JD induced pluripotent stem cell–derived hepatocytes faithfully recapitulate the pathophysiology of familial hypercholesterolemia MA Cayo, J Cai, A DeLaForest, FK Noto, M Nagaoka, BS Clark, ... Hepatology 56 (6), 2163-2171, 2012 | 156 | 2012 |
| Yap and Taz regulate retinal pigment epithelial cell fate JB Miesfeld, G Gestri, BS Clark, MA Flinn, RJ Poole, JR Bader, ... Development 142 (17), 3021-3032, 2015 | 144 | 2015 |
| Decomposing cell identity for transfer learning across cellular measurements, platforms, tissues, and species GL Stein-O’Brien, BS Clark, T Sherman, C Zibetti, Q Hu, R Sealfon, S Liu, ... Cell systems 8 (5), 395-411. e8, 2019 | 137 | 2019 |
| Evf2 lncRNA/BRG1/DLX1 interactions reveal RNA-dependent inhibition of chromatin remodeling I Cajigas, DE Leib, J Cochrane, H Luo, KR Swyter, S Chen, BS Clark, ... Development 142 (15), 2641-2652, 2015 | 116 | 2015 |
| Generation of Rab‐based transgenic lines for in vivo studies of endosome biology in zebrafish BS Clark, M Winter, AR Cohen, BA Link Developmental Dynamics 240 (11), 2452-2465, 2011 | 98 | 2011 |
| Lhx2 is an essential factor for retinal gliogenesis and notch signaling J de Melo, C Zibetti, BS Clark, W Hwang, AL Miranda-Angulo, J Qian, ... Journal of Neuroscience 36 (8), 2391-2405, 2016 | 87 | 2016 |
| Loss of Llgl1 in retinal neuroepithelia reveals links between apical domain size, Notch activity and neurogenesis BS Clark, S Cui, JB Miesfeld, O Klezovitch, V Vasioukhin, BA Link Development 139 (9), 1599-1610, 2012 | 87 | 2012 |
| Comprehensive identification of mRNA isoforms reveals the diversity of neural cell-surface molecules with roles in retinal development and disease TA Ray, K Cochran, C Kozlowski, J Wang, G Alexander, MA Cady, ... Nature communications 11 (1), 3328, 2020 | 86 | 2020 |
| Mirror‐symmetric microtubule assembly and cell interactions drive lumen formation in the zebrafish neural rod CE Buckley, X Ren, LC Ward, GC Girdler, C Araya, MJ Green, BS Clark, ... The EMBO journal 32 (1), 30-44, 2013 | 71 | 2013 |
| ASCOT identifies key regulators of neuronal subtype-specific splicing JP Ling, C Wilks, R Charles, PJ Leavey, D Ghosh, L Jiang, CP Santiago, ... Nature communications 11 (1), 137, 2020 | 60 | 2020 |
| Gene regulatory networks controlling temporal patterning, neurogenesis, and cell-fate specification in mammalian retina P Lyu, T Hoang, CP Santiago, ED Thomas, AE Timms, H Appel, ... Cell reports 37 (7), 2021 | 57 | 2021 |
| A toolbox of immunoprecipitation-grade monoclonal antibodies to human transcription factors A Venkataraman, K Yang, J Irizarry, M Mackiewicz, P Mita, Z Kuang, ... Nature methods 15 (5), 330-338, 2018 | 54 | 2018 |
| Understanding the role of lncRNAs in nervous system development BS Clark, S Blackshaw Long Non Coding RNA Biology, 253-282, 2017 | 48 | 2017 |
| Atoh7-independent specification of retinal ganglion cell identity J Brodie-Kommit, BS Clark, Q Shi, F Shiau, DW Kim, J Langel, C Sheely, ... Science advances 7 (11), eabe4983, 2021 | 46 | 2021 |
| Integrin α5/fibronectin1 and focal adhesion kinase are required for lens fiber morphogenesis in zebrafish JM Hayes, A Hartsock, BS Clark, HRL Napier, BA Link, JM Gross Molecular biology of the cell 23 (24), 4725-4738, 2012 | 42 | 2012 |
| Multiple intrinsic factors act in concert with Lhx2 to direct retinal gliogenesis J De Melo, BS Clark, S Blackshaw Scientific reports 6 (1), 32757, 2016 | 37 | 2016 |
