Vikas Nanda
Vikas Nanda
Professor of Biochemistry, Robert Wood Johnson Medical School
Verified email at cabm.rutgers.edu
Title
Cited by
Cited by
Year
Structural basis for the function and inhibition of an influenza virus proton channel
AL Stouffer, R Acharya, D Salom, AS Levine, L Di Costanzo, CS Soto, ...
Nature 451 (7178), 596-599, 2008
5912008
Designing artificial enzymes by intuition and computation
V Nanda, RL Koder
Nature chemistry 2 (1), 15-24, 2010
2162010
Dimerization of the transmembrane domain of integrin αIIb subunit in cell membranes
R Li, R Gorelik, V Nanda, PB Law, JD Lear, WF DeGrado, JS Bennett
Journal of Biological Chemistry 279 (25), 26666-26673, 2004
1772004
Computational de novo design and characterization of a four-helix bundle protein that selectively binds a nonbiological cofactor
FV Cochran, SP Wu, W Wang, V Nanda, JG Saven, MJ Therien, ...
Journal of the American Chemical Society 127 (5), 1346-1347, 2005
1712005
A push-pull mechanism for regulating integrin function
W Li, DG Metcalf, R Gorelik, R Li, N Mitra, V Nanda, PB Law, JD Lear, ...
Proceedings of the National Academy of Sciences 102 (5), 1424-1429, 2005
1452005
Ez, a depth-dependent potential for assessing the energies of insertion of amino acid side-chains into membranes: derivation and applications to determining the orientation of …
A Senes, DC Chadi, PB Law, RFS Walters, V Nanda, WF DeGrado
Journal of molecular biology 366 (2), 436-448, 2007
1372007
De novo design of a redox-active minimal rubredoxin mimic
V Nanda, MM Rosenblatt, A Osyczka, H Kono, Z Getahun, PL Dutton, ...
Journal of the American Chemical Society 127 (16), 5804-5805, 2005
1212005
A new method for determining the local environment and orientation of individual side chains of membrane-binding peptides
MJ Tucker, Z Getahun, V Nanda, WF DeGrado, F Gai
Journal of the American Chemical Society 126 (16), 5078-5079, 2004
1112004
Empirical lipid propensities of amino acid residues in multispan alpha helical membrane proteins
L Adamian, V Nanda, WF DeGrado, J Liang
Proteins: Structure, Function, and Bioinformatics 59 (3), 496-509, 2005
1062005
Aromatic interactions promote self-association of collagen triple-helical peptides to higher-order structures
K Kar, S Ibrar, V Nanda, TM Getz, SP Kunapuli, B Brodsky
Biochemistry 48 (33), 7959-7968, 2009
1002009
The conformation of the pore region of the M2 proton channel depends on lipid bilayer environment
KC Duong‐Ly, V Nanda, WF DeGrado, KP Howard
Protein science 14 (4), 856-861, 2005
952005
Sequence determinants of a transmembrane proton channel: an inverse relationship between stability and function
AL Stouffer, V Nanda, JD Lear, WF DeGrado
Journal of molecular biology 347 (1), 169-179, 2005
652005
Aromatic interactions in homeodomains contribute to the low quantum yield of a conserved, buried tryptophan
V Nanda, L Brand
Proteins: Structure, Function, and Bioinformatics 40 (1), 112-125, 2000
622000
Using α-helical coiled-coils to design nanostructured metalloporphyrin arrays
KA McAllister, H Zou, FV Cochran, GM Bender, A Senes, HC Fry, V Nanda, ...
Journal of the American Chemical Society 130 (36), 11921-11927, 2008
542008
Association of a model transmembrane peptide containing gly in a heptad sequence motif
JD Lear, AL Stouffer, H Gratkowski, V Nanda, WF DeGrado
Biophysical journal 87 (5), 3421-3429, 2004
492004
De novo design of a non-natural fold for an iron–sulfur protein: Alpha-helical coiled-coil with a four-iron four-sulfur cluster binding site in its central core
J Grzyb, F Xu, L Weiner, EJ Reijerse, W Lubitz, V Nanda, D Noy
Biochimica et Biophysica Acta (BBA)-Bioenergetics 1797 (3), 406-413, 2010
482010
Computational design of a collagen A: B: C-type heterotrimer
F Xu, S Zahid, T Silva, V Nanda
Journal of the American Chemical Society 133 (39), 15260-15263, 2011
412011
Compositional control of higher order assembly using synthetic collagen peptides
F Xu, J Li, V Jain, RS Tu, Q Huang, V Nanda
Journal of the American Chemical Society 134 (1), 47-50, 2012
382012
Melittin as model system for probing interactions between proteins and cyclodextrins
M Khajehpour, T Troxler, V Nanda, JM Vanderkooi
Proteins: Structure, Function, and Bioinformatics 55 (2), 275-287, 2004
382004
A knowledge‐based potential highlights unique features of membrane α‐helical and β‐barrel protein insertion and folding
D Hsieh, A Davis, V Nanda
Protein Science 21 (1), 50-62, 2012
362012
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