Dinh Diep
Title
Cited by
Cited by
Year
Increased methylation variation in epigenetic domains across cancer types
KD Hansen, W Timp, HC Bravo, S Sabunciyan, B Langmead, ...
Nature genetics 43 (8), 768, 2011
9832011
Recapitulation of premature ageing with iPSCs from Hutchinson–Gilford progeria syndrome
GH Liu, BZ Barkho, S Ruiz, D Diep, J Qu, SL Yang, AD Panopoulos, ...
Nature 472 (7342), 221-225, 2011
4952011
Genome-wide analysis reveals TET-and TDG-dependent 5-methylcytosine oxidation dynamics
L Shen, H Wu, D Diep, S Yamaguchi, AC D’Alessio, HL Fung, K Zhang, ...
Cell 153 (3), 692-706, 2013
4652013
The metabolome of induced pluripotent stem cells reveals metabolic changes occurring in somatic cell reprogramming
AD Panopoulos, O Yanes, S Ruiz, YS Kida, D Diep, R Tautenhahn, ...
Cell research 22 (1), 168-177, 2012
4622012
Tet1 controls meiosis by regulating meiotic gene expression
S Yamaguchi, K Hong, R Liu, L Shen, A Inoue, D Diep, K Zhang, Y Zhang
Nature 492 (7429), 443-447, 2012
2482012
Advances in the profiling of DNA modifications: cytosine methylation and beyond
N Plongthongkum, DH Diep, K Zhang
Nature Reviews Genetics 15 (10), 647-661, 2014
2102014
Identification of methylation haplotype blocks aids in deconvolution of heterogeneous tissue samples and tumor tissue-of-origin mapping from plasma DNA
S Guo, D Diep, N Plongthongkum, HL Fung, K Zhang, K Zhang
Nature genetics 49 (4), 635-642, 2017
1922017
Identification of a specific reprogramming-associated epigenetic signature in human induced pluripotent stem cells
S Ruiz, D Diep, A Gore, AD Panopoulos, N Montserrat, N Plongthongkum, ...
Proceedings of the National Academy of Sciences 109 (40), 16196-16201, 2012
1682012
Quantitative comparison of DNA methylation assays for biomarker development and clinical applications
C Bock, F Halbritter, FJ Carmona, S Tierling, P Datlinger, Y Assenov, ...
Nature biotechnology 34 (7), 726-737, 2016
1162016
Multiscale modeling of metabolism and macromolecular synthesis in E. coli and its application to the evolution of codon usage
I Thiele, RMT Fleming, R Que, A Bordbar, D Diep, BO Palsson
PloS one 7 (9), e45635, 2012
1062012
Library-free methylation sequencing with bisulfite padlock probes
D Diep, N Plongthongkum, A Gore, HL Fung, R Shoemaker, K Zhang
Nature methods 9 (3), 270-272, 2012
962012
The Human Tumor Atlas Network: charting tumor transitions across space and time at single-cell resolution
O Rozenblatt-Rosen, A Regev, P Oberdoerffer, T Nawy, A Hupalowska, ...
Cell 181 (2), 236-249, 2020
392020
Winston Timp, Héctor Corrada Bravo, Sarven Sabunciyan
KD Hansen
Benjamin Langmead, Oliver G. McDonald, Bo Wen, Hao Wu, Yun Liu, Dihn Diep …, 2011
252011
Evolution of cellular diversity in primary motor cortex of human, marmoset monkey, and mouse
TE Bakken, NL Jorstad, Q Hu, BB Lake, W Tian, BE Kalmbach, M Crow, ...
bioRxiv, 2020
122020
DNA methylation identifies genetically and prognostically distinct subtypes of myelodysplastic syndromes
B Reilly, TN Tanaka, D Diep, H Yeerna, P Tamayo, K Zhang, R Bejar
Blood advances 3 (19), 2845-2858, 2019
92019
A multimodal cell census and atlas of the mammalian primary motor cortex
RS Adkins, AI Aldridge, S Allen, SA Ament, X An, E Armand, GA Ascoli, ...
bioRxiv, 2020
32020
Large-scale targeted DNA methylation analysis using bisulfite padlock probes
D Diep, N Plongthongkum, K Zhang
DNA Methylation Protocols, 365-382, 2018
12018
5mC and 5hmC dynamics during PGC reprogramming and role of Tet1 in female meiosis
S Yamaguchi, K Hong, R Liu, L Shen, A Inoue, D Diep, K Zhang, Y Zhang
Epigenetics & Chromatin 6 (1), 1-1, 2013
12013
Genome-wide analysis reveals TET-and TDG-mediated 5-methylcytosine oxidation dynamics
L Shen, H Wu, D Diep, AC D’Alessio, A Fung, K Zhang, Y Zhang
Epigenetics & Chromatin 6 (1), 1-1, 2013
12013
Primordial germ cell derivation from mouse iPS cells and associated epigenetic changes
X Li, J Deng, L Sun, D Diep, K Zhang, B Beutler
Fertility and Sterility 94 (4), S241, 2010
12010
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Articles 1–20