| High-throughput dual-colour precision imaging for brain-wide connectome with cytoarchitectonic landmarks at the cellular level H Gong, D Xu, J Yuan, X Li, C Guo, J Peng, Y Li, LA Schwarz, A Li, B Hu, ... Nature communications 7 (1), 12142, 2016 | 316 | 2016 |
| NeuroGPS-Tree: automatic reconstruction of large-scale neuronal populations with dense neurites T Quan, H Zhou, J Li, S Li, A Li, Y Li, X Lv, Q Luo, H Gong, S Zeng Nature methods 13 (1), 51-54, 2016 | 120 | 2016 |
| Genetic single neuron anatomy reveals fine granularity of cortical axo-axonic cells X Wang, J Tucciarone, S Jiang, F Yin, BS Wang, D Wang, Y Jia, X Jia, Y Li, ... Cell reports 26 (11), 3145-3159. e5, 2019 | 50 | 2019 |
| TDat: an efficient platform for processing petabyte-scale whole-brain volumetric images Y Li, H Gong, X Yang, J Yuan, T Jiang, X Li, Q Sun, D Zhu, Z Wang, Q Luo, ... Frontiers in neural circuits 11, 51, 2017 | 48 | 2017 |
| Single-axon level morphological analysis of corticofugal projection neurons in mouse barrel field C Guo, J Peng, Y Zhang, A Li, Y Li, J Yuan, X Xu, M Ren, H Gong, S Chen Scientific reports 7 (1), 2846, 2017 | 39 | 2017 |
| SparseTracer: the reconstruction of discontinuous neuronal morphology in noisy images S Li, H Zhou, T Quan, J Li, Y Li, A Li, Q Luo, H Gong, S Zeng Neuroinformatics 15, 133-149, 2017 | 25 | 2017 |
| VBNet: An end-to-end 3D neural network for vessel bifurcation point detection in mesoscopic brain images Y Li, T Ren, J Li, H Wang, X Li, A Li Computer Methods and Programs in Biomedicine 214, 106567, 2022 | 6 | 2022 |
| Whole‐mount in situ hybridization of mouse brain to precisely locate mRNAs via fluorescence tomography W Guo, X Liu, Q Hu, F Huang, N Li, Q Zhang, Y Li, F Xiong, Q Luo, S Zeng Journal of biophotonics 12 (4), e201800249, 2019 | 6 | 2019 |
| Multi-perspective label based deep learning framework for cerebral vasculature segmentation in whole-brain fluorescence images Y Li, T Ren, J Li, X Li, A Li Biomedical Optics Express 13 (6), 3657-3671, 2022 | 4 | 2022 |
| Cerebrovascular segmentation from mesoscopic optical images using Swin Transformer Y Li, Q Zhang, H Zhou, J Li, X Li, A Li Journal of Innovative Optical Health Sciences 16 (04), 2350009, 2023 | 3 | 2023 |
| A high-performance deep-learning-based pipeline for whole-brain vasculature segmentation at the capillary resolution Y Li, X Liu, X Jia, T Jiang, J Wu, Q Zhang, J Li, X Li, A Li Bioinformatics 39 (4), btad145, 2023 | 2 | 2023 |
| 3D visualization and detection of glomeruli in whole mouse kidney Y Li, J Cao, A Li, X Li, Z Feng Sixteenth International Conference on Photonics and Imaging in Biology and …, 2023 | 1 | 2023 |
| webTDat: a web-based, real-time, 3D visualization framework for mesoscopic whole-brain images Y Li, A Li, J Li, H Zhou, T Cao, H Wang, K Wang Frontiers in Neuroinformatics 14, 542169, 2021 | 1 | 2021 |
| Fast and automatic imaging of immunoenzyme-stained neuronal circuits in the whole brain of Drosophila Q Tian, J Yuan, Y Li, T Jiang, H Gong, W Zhou Journal of Biomedical Optics 19 (9), 090506-090506, 2014 | 1 | 2014 |
| A simple, rapid method to precisely locate mRNAs of intact mouse brain via fluorescence tomography W Guo, X Liu, Y Gang, F Yin, P Li, F Huang, N Li, Q Zhang, Y Li, Y Jia, ... International Conference on Photonics and Imaging in Biology and Medicine …, 2017 | | 2017 |
| 3D Affine Registration of Large Image Stack for High-Resolution Brain Imaging Techniques C Tan, Z Feng, H Ni, Y Li, H Gong, Q Luo, A Li International Conference on Photonics and Imaging in Biology and Medicine …, 2017 | | 2017 |
