| Progesterone dampens immune responses in in vitro activated CD4+ T cells and affects genes associated with autoimmune diseases that improve during pregnancy S Hellberg, J Raffetseder, O Rundquist, R Magnusson, G Papapavlou, ... Frontiers in Immunology 12, 672168, 2021 | 28 | 2021 |
| LiPLike: towards gene regulatory network predictions of high certainty R Magnusson, M Gustafsson Bioinformatics 36 (8), 2522-2529, 2020 | 17 | 2020 |
| Hybrid modelling for stroke care: Review and suggestions of new approaches for risk assessment and simulation of scenarios T Herrgårdh, VI Madai, JD Kelleher, R Magnusson, M Gustafsson, ... NeuroImage: Clinical 31, 102694, 2021 | 15 | 2021 |
| Cross-talks via mTORC2 can explain enhanced activation in response to insulin in diabetic patients R Magnusson, M Gustafsson, G Cedersund, P Strålfors, E Nyman Bioscience reports 37 (1), BSR20160514, 2017 | 14 | 2017 |
| RNA-sequencing and mass-spectrometry proteomic time-series analysis of T-cell differentiation identified multiple splice variants models that predicted validated protein … R Magnusson, O Rundquist, MJ Kim, S Hellberg, CH Na, M Benson, ... Frontiers in Molecular Biosciences 9, 916128, 2022 | 13* | 2022 |
| Deep neural network prediction of genome-wide transcriptome signatures–beyond the Black-box R Magnusson, JN Tegnér, M Gustafsson npj Systems Biology and Applications 8 (1), 9, 2022 | 13 | 2022 |
| ComHub: Community predictions of hubs in gene regulatory networks J Åkesson, Z Lubovac-Pilav, R Magnusson, M Gustafsson BMC bioinformatics 22, 1-12, 2021 | 12 | 2021 |
| LASSIM—A network inference toolbox for genome-wide mechanistic modeling R Magnusson, GP Mariotti, M Köpsén, W Lövfors, DR Gawel, R Jörnsten, ... PLoS computational biology 13 (6), e1005608, 2017 | 11 | 2017 |
| TFTenricher: a python toolbox for annotation enrichment analysis of transcription factor target genes R Magnusson, Z Lubovac-Pilav BMC bioinformatics 22, 1-6, 2021 | 3 | 2021 |
| A comprehensive mechanistic model of adipocyte signaling with layers of confidence W Lövfors, R Magnusson, C Jönsson, M Gustafsson, CS Olofsson, ... npj Systems Biology and Applications 9 (1), 24, 2023 | 1 | 2023 |
| Regional transcriptomic profiling reveals immune system enrichment in nonfailing atria and all chambers of the failing human heart M Sandstedt, K Vukusic, M Johansson, M Jonsson, R Magnusson, ... American Journal of Physiology-Heart and Circulatory Physiology 325 (6 …, 2023 | | 2023 |
| Representational Learning from Healthy Multi-Tissue Human RNA-seq Data such that Latent Space Arithmetics Extracts Disease Modules HA de Weerd, D Guala, M Gustafsson, J Synnergren, J Tegner, ... bioRxiv, 2023.10. 03.560661, 2023 | | 2023 |
| NetAn: A Python Toolbox Leveraging Network Topology for Comprehensive Gene Annotation Enrichments R Magnusson bioRxiv, 2023.09. 05.556339, 2023 | | 2023 |
| High Confidence Network Predictions from Big Biological Data R Magnusson Linköping University Electronic Press, 2020 | | 2020 |
