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Swagatam Mukhopadhyay
Swagatam Mukhopadhyay
Creyon Bio.
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Title
Cited by
Cited by
Year
Chemical modification of PS-ASO therapeutics reduces cellular protein-binding and improves the therapeutic index
W Shen, CL De Hoyos, MT Migawa, TA Vickers, H Sun, A Low, TA Bell, ...
Nature biotechnology 37 (6), 640-650, 2019
1432019
Internucleosomal interactions mediated by histone tails allow distant communication in chromatin
OI Kulaeva, G Zheng, YS Polikanov, AV Colasanti, N Clauvelin, ...
Journal of Biological Chemistry 287 (24), 20248-20257, 2012
492012
Synthesizing arbitrary two-photon polarization mixed states
TC Wei, JB Altepeter, D Branning, PM Goldbart, DFV James, E Jeffrey, ...
Physical review A 71 (3), 032329, 2005
482005
Inheritance of epigenetic chromatin silencing
D David-Rus, S Mukhopadhyay, JL Lebowitz, AM Sengupta
Journal of theoretical biology 258 (1), 112-120, 2009
452009
Theoretical analysis of the role of chromatin interactions in long-range action of enhancers and insulators
S Mukhopadhyay, P Schedl, VM Studitsky, AM Sengupta
Proceedings of the National Academy of Sciences 108 (50), 19919-19924, 2011
372011
Anomalous diffusion and stretched exponentials in heterogeneous glass-forming liquids: Low-temperature behavior
JS Langer, S Mukhopadhyay
Physical Review E 77 (6), 061505, 2008
292008
Double-exchange model for noninteracting electron spins coupled to a lattice of classical spins: Phase diagram at zero temperature
D Pekker, S Mukhopadhyay, N Trivedi, PM Goldbart
Physical Review B 72 (7), 075118, 2005
222005
Nematic elastomers: from a microscopic model to macroscopic elasticity theory
X Xing, S Pfahl, S Mukhopadhyay, PM Goldbart, A Zippelius
Physical Review E 77 (5), 051802, 2008
212008
Scaling of entropic shear rigidity
X Xing, S Mukhopadhyay, PM Goldbart
Physical review letters 93 (22), 225701, 2004
212004
Goldstone fluctuations in the amorphous solid state
S Mukhopadhyay, PM Goldbart, A Zippelius
EPL (Europhysics Letters) 67 (1), 49, 2004
202004
A modular analysis of microglia gene expression, insights into the aged phenotype
CE Cho, SS Damle, EV Wancewicz, S Mukhopadhyay, CE Hart, C Mazur, ...
BMC genomics 20 (1), 1-16, 2019
192019
Locus dependence in epigenetic chromatin silencing
S Mukhopadhyay, VH Nagaraj, AM Sengupta
Biosystems 102 (1), 49-54, 2010
172010
The role of multiple marks in epigenetic silencing and the emergence of a stable bivalent chromatin state
S Mukhopadhyay, AM Sengupta
PLoS computational biology 9 (7), e1003121, 2013
152013
Goldstone-type fluctuations and their implications for the amorphous solid state
PM Goldbart, S Mukhopadhyay, A Zippelius
Physical Review B 70 (18), 184201, 2004
122004
Breaking an Epigenetic Chromatin Switch: Curious Features of Hysteresis in Saccharomyces cerevisiae Telomeric Silencing
VH Nagaraj, S Mukhopadhyay, A Dayarian, AM Sengupta
PLoS One 9 (12), e113516, 2014
92014
Quantitative analysis of chromatin interaction changes upon a 4.3 Mb deletion at mouse 4E2
CJ Zepeda-Mendoza, S Mukhopadhyay, ES Wong, N Harder, E Splinter, ...
BMC genomics 16 (1), 1-17, 2015
32015
From vulcanization to isotropic and nematic rubber elasticity
X Xing, S Mukhopadhyay, PM Goldbart, A Zippelius
arXiv preprint cond-mat/0411660, 2004
32004
What does the Allen Gene Expression Atlas tell us about mouse brain evolution?
S Mukhopadhyay, P Grange, AM Sengupta, PP Mitra
arXiv preprint arXiv:1206.0324, 2012
12012
Machine-learned pharmacology optimization
S Mukhopadhyay
US Patent App. 17/526,775, 2022
2022
Oligonucleotide-based machine learning
S Mukhopadhyay, CE Hart
US Patent App. 17/220,725, 2021
2021
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