|R/qtl: QTL mapping in experimental crosses|
KW Broman, H Wu, Ś Sen, GA Churchill
Bioinformatics 19 (7), 889-890, 2003
|Brain-region-specific organoids using mini-bioreactors for modeling ZIKV exposure|
X Qian, HN Nguyen, MM Song, C Hadiono, SC Ogden, C Hammack, ...
Cell 165 (5), 1238-1254, 2016
|Increased methylation variation in epigenetic domains across cancer types|
KD Hansen, W Timp, HC Bravo, S Sabunciyan, B Langmead, ...
Nature genetics 43 (8), 768-775, 2011
|5-hmC-mediated epigenetic dynamics during postnatal neurodevelopment and aging|
KE Szulwach, X Li, Y Li, CX Song, H Wu, Q Dai, H Irier, AK Upadhyay, ...
Nature Neuroscience, 2011
|Large histone H3 lysine 9 dimethylated chromatin blocks distinguish differentiated from embryonic stem cells|
B Wen, H Wu, Y Shinkai, RA Irizarry, AP Feinberg
Nature genetics 41 (2), 246-250, 2009
|Genome-wide Profiling of 5-Formylcytosine Reveals Its Roles in Epigenetic Priming|
CX Song, KE Szulwach, Q Dai, Y Fu, SQ Mao, L Lin, C Street, Y Li, ...
|Comprehensive high-throughput arrays for relative methylation (CHARM)|
RA Irizarry, C Ladd-Acosta, B Carvalho, H Wu, SA Brandenburg, ...
Genome research 18 (5), 780-790, 2008
|MAANOVA: a software package for the analysis of spotted cDNA microarray experiments|
H Wu, MK Kerr, X Cui, GA Churchill
The analysis of gene expression data: methods and software, 313-341, 2003
|Genome-scale epigenetic reprogramming during epithelial-to-mesenchymal transition|
OG McDonald, H Wu, W Timp, A Doi, AP Feinberg
Nature Structural & Molecular Biology 18 (8), 867-874, 2011
|A Bayesian hierarchical model to detect differentially methylated loci from single nucleotide resolution sequencing data|
H Feng, KN Conneely, H Wu
Nucleic acids research 42 (8), e69-e69, 2014
|Long-Lived Plasma Cells Are Contained within the CD19− CD38 hi CD138+ Subset in Human Bone Marrow|
JL Halliley, CM Tipton, J Liesveld, AF Rosenberg, J Darce, IV Gregoretti, ...
Immunity 43 (1), 132-145, 2015
|Epigenomic reprogramming during pancreatic cancer progression links anabolic glucose metabolism to distant metastasis|
OG McDonald, X Li, T Saunders, R Tryggvadottir, SJ Mentch, ...
Nature genetics 49 (3), 367-376, 2017
|A new shrinkage estimator for dispersion improves differential expression detection in RNA-seq data|
H Wu, C Wang, Z Wu
|U1 small nuclear ribonucleoprotein complex and RNA splicing alterations in Alzheimer’s disease|
B Bai, CM Hales, PC Chen, Y Gozal, EB Dammer, JJ Fritz, X Wang, Q Xia, ...
Proceedings of the National Academy of Sciences 110 (41), 16562-16567, 2013
|Genome-wide DNA hydroxymethylation changes are associated with neurodevelopmental genes in the developing human cerebellum|
T Wang, Q Pan, L Lin, KE Szulwach, CX Song, C He, H Wu, ST Warren, ...
Human molecular genetics 21 (26), 5500-5510, 2012
|Redefining CpG islands using hidden Markov models|
H Wu, B Caffo, HA Jaffee, RA Irizarry, AP Feinberg
Biostatistics 11 (3), 499-514, 2010
|Detection of differentially methylated regions from whole-genome bisulfite sequencing data without replicates|
H Wu, T Xu, H Feng, L Chen, B Li, B Yao, Z Qin, P Jin, KN Conneely
Nucleic acids research 43 (21), e141-e141, 2015
|Cell-Cycle Control of Developmentally Regulated Transcription Factors Accounts for Heterogeneity in Human Pluripotent Cells|
AM Singh, J Chappell, R Trost, L Lin, T Wang, J Tang, H Wu, S Zhao, ...
Stem cell reports 1 (6), 532-544, 2013
|R/qtlbim: QTL with Bayesian interval mapping in experimental crosses|
BS Yandell, T Mehta, S Banerjee, D Shriner, R Venkataraman, JY Moon, ...
Bioinformatics 23 (5), 641-643, 2007
|Differential methylation analysis for BS-seq data under general experimental design|
Y Park, H Wu
Bioinformatics 32 (10), 1446-1453, 2016