A comparative study of SVDquartets and other coalescent-based species tree estimation methods J Chou, A Gupta, S Yaduvanshi, R Davidson, M Nute, S Mirarab, ... BMC genomics 16, 1-11, 2015 | 172 | 2015 |
Phylogenomic species tree estimation in the presence of incomplete lineage sorting and horizontal gene transfer R Davidson, P Vachaspati, S Mirarab, T Warnow BMC genomics 16, 1-12, 2015 | 92 | 2015 |
Efficient quartet representations of trees and applications to supertree and summary methods R Davidson, ML Lawhorn, J Rusinko, N Weber IEEE/ACM Transactions on Computational Biology and Bioinformatics 15 (3 …, 2016 | 11 | 2016 |
Combinatorial and computational investigations of neighbor-joining bias R Davidson, A Martín del Campo Frontiers in Genetics 11, 584785, 2020 | 10 | 2020 |
Distance-based phylogenetic methods around a polytomy R Davidson, S Sullivant IEEE/ACM Transactions on Computational Biology and Bioinformatics 11 (2 …, 2014 | 9 | 2014 |
Phylogenetic trees H Banos, N Bushek, R Davidson, E Gross, PE Harris, R Krone, C Long, ... Journal of Software for Algebra and Geometry 11 (1), 1-7, 2022 | 8 | 2022 |
Dimensions of group-based phylogenetic mixtures H Baños, N Bushek, R Davidson, E Gross, PE Harris, R Krone, C Long, ... Bulletin of mathematical biology 81, 316-336, 2019 | 8 | 2019 |
A lexicographic shellability characterization of geometric lattices R Davidson, P Hersh Journal of Combinatorial Theory, Series A 123 (1), 8-13, 2014 | 8 | 2014 |
Polyhedral combinatorics of UPGMA cones R Davidson, S Sullivant Advances in Applied Mathematics 50 (2), 327-338, 2013 | 8 | 2013 |
RGB image-based data analysis via discrete Morse theory and persistent homology C Du, C Szul, A Manawa, N Rasekh, RK Guzman, R Davidson arXiv preprint arXiv:1801.09530, 2018 | 5 | 2018 |
A combinatorial method for connecting BHV spaces representing different numbers of taxa Y Ren, S Zha, J Bi, JA Sanchez, C Monical, M Delcourt, RK Guzman, ... arXiv preprint arXiv:1708.02626, 2017 | 5 | 2017 |
Modeling the Distribution of Distance Data in Euclidean Space R Davidson, J Rusinko, Z Vernon, J Xi Contemporary Mathematics 685, 126-142, 2017 | 1 | 2017 |
Some problems in geometric combinatorics and mathematical phylogenetics RE Davidson North Carolina State University, 2014 | 1 | 2014 |
efficientquartets: Software for Boosting Quartet-Assembly Method Computational Speed R Davidson, ML Lawhorn, J Rusinko, N Weber https://github.com/redavids/efficientquartets, 2016 | | 2016 |
A new shellability proof of an identity of Dixon R Davidson, A O'Keefe, D Parry arXiv preprint arXiv:1512.00080, 2015 | | 2015 |
2014 Index IEEE/ACM Transactions on Computational Biology and Bioinformatics Vol. 11 R Acharya, AA Adl, M Agostini, HA Ahmed, A Airola, K Al Nasr, ... IEEE TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS 11 (6), 1273, 2014 | | 2014 |