| Transcriptome engineering with RNA-targeting type VI-D CRISPR effectors S Konermann, P Lotfy, NJ Brideau, J Oki, MN Shokhirev, PD Hsu Cell 173 (3), 665-676. e14, 2018 | 935 | 2018 |
| The aging astrocyte transcriptome from multiple regions of the mouse brain MM Boisvert, GA Erikson, MN Shokhirev, NJ Allen Cell reports 22 (1), 269-285, 2018 | 553 | 2018 |
| Glioblastoma model using human cerebral organoids J Ogawa, GM Pao, MN Shokhirev, IM Verma Cell reports 23 (4), 1220-1229, 2018 | 318 | 2018 |
| Uptake of oxidized lipids by the scavenger receptor CD36 promotes lipid peroxidation and dysfunction in CD8+ T cells in tumors S Xu, O Chaudhary, P Rodríguez-Morales, X Sun, D Chen, R Zappasodi, ... Immunity 54 (7), 1561-1577. e7, 2021 | 289 | 2021 |
| Genetic liver-specific AMPK activation protects against diet-induced obesity and NAFLD D Garcia, K Hellberg, A Chaix, M Wallace, S Herzig, MG Badur, T Lin, ... Cell reports 26 (1), 192-208. e6, 2019 | 226 | 2019 |
| An activity-guided map of electrophile-cysteine interactions in primary human T cells EV Vinogradova, X Zhang, D Remillard, DC Lazar, RM Suciu, Y Wang, ... Cell 182 (4), 1009-1026. e29, 2020 | 216 | 2020 |
| Chromatin accessibility underlies synthetic lethality of SWI/SNF subunits in ARID1A-mutant cancers TWR Kelso, DK Porter, ML Amaral, MN Shokhirev, C Benner, ... Elife 6, e30506, 2017 | 183 | 2017 |
| A non-canonical BRD9-containing BAF chromatin remodeling complex regulates naive pluripotency in mouse embryonic stem cells J Gatchalian, S Malik, J Ho, DS Lee, TWR Kelso, MN Shokhirev, JR Dixon, ... Nature communications 9 (1), 5139, 2018 | 176 | 2018 |
| AMPK governs lineage specification through Tfeb-dependent regulation of lysosomes NP Young, A Kamireddy, JL Van Nostrand, LJ Eichner, MN Shokhirev, ... Genes & development 30 (5), 535-552, 2016 | 168 | 2016 |
| Predicting age from the transcriptome of human dermal fibroblasts JG Fleischer, R Schulte, HH Tsai, S Tyagi, A Ibarra, MN Shokhirev, ... Genome biology 19, 1-8, 2018 | 167 | 2018 |
| Genetic analysis reveals AMPK is required to support tumor growth in murine Kras-dependent lung cancer models LJ Eichner, SN Brun, S Herzig, NP Young, SD Curtis, DB Shackelford, ... Cell metabolism 29 (2), 285-302. e7, 2019 | 166 | 2019 |
| Accurate annotation of human protein-coding small open reading frames TF Martinez, Q Chu, C Donaldson, D Tan, MN Shokhirev, A Saghatelian Nature chemical biology 16 (4), 458-468, 2020 | 160 | 2020 |
| A B-ARR-mediated cytokinin transcriptional network directs hormone cross-regulation and shoot development M Xie, H Chen, L Huang, RC O’Neil, MN Shokhirev, JR Ecker Nature communications 9 (1), 1604, 2018 | 160 | 2018 |
| Differentiation of inflammation-responsive astrocytes from glial progenitors generated from human induced pluripotent stem cells R Santos, KC Vadodaria, BN Jaeger, A Mei, S Lefcochilos-Fogelquist, ... Stem cell reports 8 (6), 1757-1769, 2017 | 158 | 2017 |
| Efficient generation of CA3 neurons from human pluripotent stem cells enables modeling of hippocampal connectivity in vitro A Sarkar, A Mei, ACM Paquola, S Stern, C Bardy, JR Klug, S Kim, ... Cell stem cell 22 (5), 684-697. e9, 2018 | 124 | 2018 |
| In vivo reprogramming of wound-resident cells generates skin epithelial tissue M Kurita, T Araoka, T Hishida, DD O’keefe, Y Takahashi, A Sakamoto, ... Nature 561 (7722), 243-247, 2018 | 122 | 2018 |
| Cooperative metabolic adaptations in the host can favor asymptomatic infection and select for attenuated virulence in an enteric pathogen KK Sanchez, GY Chen, AMP Schieber, SE Redford, MN Shokhirev, ... Cell 175 (1), 146-158. e15, 2018 | 121 | 2018 |
| The AMPK-related kinases SIK1 and SIK3 mediate key tumor-suppressive effects of LKB1 in NSCLC PE Hollstein, LJ Eichner, SN Brun, A Kamireddy, RU Svensson, LI Vera, ... Cancer discovery 9 (11), 1606-1627, 2019 | 106 | 2019 |
| An RNA polymerase ribozyme that synthesizes its own ancestor KF Tjhung, MN Shokhirev, DP Horning, GF Joyce Proceedings of the National Academy of Sciences 117 (6), 2906-2913, 2020 | 105 | 2020 |
| Systematic review and analysis of human proteomics aging studies unveils a novel proteomic aging clock and identifies key processes that change with age AA Johnson, MN Shokhirev, T Wyss-Coray, B Lehallier Ageing research reviews 60, 101070, 2020 | 97 | 2020 |
Galina EriksonBioinformatician, Max Planck Institute for Immunobiology and Epigenetics, Freiburg, GermanyVerified email at salk.edu
