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Ruman Gerst
Ruman Gerst
Leibniz Institute for Natural Product Research and Infection Biology – Hans Knöll Institute (HKI)
Verified email at leibniz-hki.de
Title
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Year
Bacterial endosymbionts protect beneficial soil fungus from nematode attack
H Büttner, SP Niehs, K Vandelannoote, Z Cseresnyés, B Dose, I Richter, ...
Proceedings of the National Academy of Sciences 118 (37), e2110669118, 2021
462021
Global importance of RNA secondary structures in protein-coding sequences
M Fricke, R Gerst, B Ibrahim, M Niepmann, M Marz
Bioinformatics 35 (4), 579-583, 2019
192019
JIPipe: visual batch processing for ImageJ
R Gerst, Z Cseresnyés, MT Figge
nature methods 20 (2), 168-169, 2023
132023
Toxin-producing endosymbionts shield pathogenic fungus against micropredators
I Richter, S Radosa, Z Cseresnyés, I Ferling, H Büttner, SP Niehs, R Gerst, ...
MBio 13 (5), e01440-22, 2022
122022
Spatial quantification of clinical biomarker pharmacokinetics through deep learning-based segmentation and signal-oriented analysis of MSOT data
B Hoffmann, R Gerst, Z Cseresnyés, WL Foo, O Sommerfeld, AT Press, ...
Photoacoustics 26, 100361, 2022
52022
MISA++: a standardized interface for automated bioimage analysis
R Gerst, A Medyukhina, MT Figge
SoftwareX 11, 100405, 2020
32020
Evaluation of reproducible cryogel preparation based on automated image analysis using deep learning
F Behrendt, Z Cseresnyés, R Gerst, M Gottschaldt, MT Figge, US Schubert
Journal of Biomedical Materials Research Part A 111 (11), 1734-1749, 2023
22023
The global RNA–RNA interactome of Klebsiella pneumoniae unveils a small RNA regulator of cell division
E Ruhland, M Siemers, R Gerst, F Späth, LN Vogt, MT Figge, K Papenfort, ...
Proceedings of the National Academy of Sciences 121 (9), e2317322121, 2024
2024
JIPipe: Visual batch processing for ImageJ
M Figge, R Gerst, Z Cseresnyes
2022
MISA++: a standardized interface for automated bioimage analysis-Supplementary text
R Gerst, A Medyukhina, MT Figge
2020
Supplementary information JIPipe: Visual batch processing for ImageJ
R Gerst, Z Cseresnyés, MT Figge
JIPipe: Designing automated image analysis pipelines without programming
R Gerst, Z Cseresnyés, MT Figge
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