Benjamin Audit
Benjamin Audit
Laboratoire de Physique, Ecole Normale Supérieure de Lyon
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Are splicing mutations the most frequent cause of hereditary disease?
N López-Bigas, B Audit, C Ouzounis, G Parra, R Guigó
FEBS letters 579 (9), 1900-1903, 2005
Impact of replication timing on non-CpG and CpG substitution rates in mammalian genomes
CL Chen, A Rappailles, L Duquenne, M Huvet, G Guilbaud, L Farinelli, ...
Genome research 20 (4), 447-457, 2010
Modeling the percolation of annotation errors in a database of protein sequences
WR Gilks, B Audit, D De Angelis, S Tsoka, CA Ouzounis
Bioinformatics 18 (12), 1641-1649, 2002
Human gene organization driven by the coordination of replication and transcription
M Huvet, S Nicolay, M Touchon, B Audit, Y d'Aubenton-Carafa, A Arneodo, ...
Genome research 17 (9), 1278-1285, 2007
Long-range correlations in genomic DNA: a signature of the nucleosomal structure
B Audit, C Thermes, C Vaillant, Y d'Aubenton-Carafa, JF Muzy, A Arneodo
Physical Review Letters 86 (11), 2471, 2001
Evidence for sequential and increasing activation of replication origins along replication timing gradients in the human genome
G Guilbaud, A Rappailles, A Baker, CL Chen, A Arneodo, A Goldar, ...
PLoS computational biology 7 (12), e1002322, 2011
The spatiotemporal program of DNA replication is associated with specific combinations of chromatin marks in human cells
F Picard, JC Cadoret, B Audit, A Arneodo, A Alberti, C Battail, L Duret, ...
PLoS genetics 10 (5), e1004282, 2014
Wavelet-based estimators of scaling behavior
B Audit, E Bacry, JF Muzy, A Arneodo
IEEE Transactions on Information Theory 48 (11), 2938-2954, 2002
Wavelet based multifractal formalism: applications to DNA sequences, satellite images of the cloud structure, and stock market data
A Arneodo, B Audit, N Decoster, JF Muzy, C Vaillant
The science of disasters, 26-102, 2002
Multi-scale coding of genomic information: From DNA sequence to genome structure and function
A Arneodo, C Vaillant, B Audit, F Argoul, Y d’Aubenton-Carafa, ...
Physics Reports 498 (2-3), 45-188, 2011
Long-range correlations between DNA bending sites: relation to the structure and dynamics of nucleosomes
B Audit, C Vaillant, A Arneodo, Y d'Aubenton-Carafa, C Thermes
Journal of molecular biology 316 (4), 903-918, 2002
Replication-associated strand asymmetries in mammalian genomes: toward detection of replication origins
M Touchon, S Nicolay, B Audit, EB Brodie of Brodie, Y d'Aubenton-Carafa, ...
Proceedings of the National Academy of Sciences 102 (28), 9836-9841, 2005
What can we learn with wavelets about DNA sequences?
A Arneodo, Y d’Aubenton-Carafa, B Audit, E Bacry, JF Muzy, C Thermes
Physica A: Statistical Mechanics and its Applications 249 (1-4), 439-448, 1998
Wavelet-based multifractal analysis of dynamic infrared thermograms to assist in early breast cancer diagnosis
E Gerasimova, B Audit, SG Roux, A Khalil, O Gileva, F Argoul, O Naimark, ...
Frontiers in physiology 5, 176, 2014
Percolation of annotation errors through hierarchically structured protein sequence databases
WR Gilks, B Audit, D De Angelis, S Tsoka, CA Ouzounis
Mathematical biosciences 193 (2), 223-234, 2005
A novel strategy of transcription regulation by intragenic nucleosome ordering
C Vaillant, L Palmeira, G Chevereau, B Audit, Y d'Aubenton-Carafa, ...
Genome research 20 (1), 59-67, 2010
Genome sequences and great expectations
I Iliopoulos, S Tsoka, MA Andrade, P Janssen, B Audit, A Tramontano, ...
Genome Biology 2 (1), 1-3, 2000
Experiments confirm the influence of genome long-range correlations on nucleosome positioning
C Vaillant, B Audit, A Arneodo
Physical review letters 99 (21), 218103, 2007
Brodie of Brodie EB, d'Aubenton-Carafa Y, Arneodo A, Thermes C: Replication-associated strand asymmetries in mammalian genomes: toward detection of replication origins
M Touchon, S Nicolay, B Audit
Proc Natl Acad Sci USA 102 (28), 9836-9841, 2005
3D chromatin conformation correlates with replication timing and is conserved in resting cells
B Moindrot, B Audit, P Klous, A Baker, C Thermes, W de Laat, P Bouvet, ...
Nucleic acids research 40 (19), 9470-9481, 2012
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