A. Ercument Cicek
A. Ercument Cicek
Assistant Professor, Bilkent University; Adj. Faculty Member, Carnegie Mellon University
Verified email at cs.bilkent.edu.tr - Homepage
Title
Cited by
Cited by
Year
Synaptic, transcriptional and chromatin genes disrupted in autism
S De Rubeis, X He, AP Goldberg, CS Poultney, K Samocha, AE Cicek, ...
Nature 515 (7526), 209-215, 2014
16612014
Insights into autism spectrum disorder genomic architecture and biology from 71 risk loci
SJ Sanders, X He, AJ Willsey, AG Ercan-Sencicek, KE Samocha, ...
Neuron 87 (6), 1215-1233, 2015
8142015
Gene expression elucidates functional impact of polygenic risk for schizophrenia
M Fromer, P Roussos, SK Sieberts, JS Johnson, DH Kavanagh, ...
Nature neuroscience 19 (11), 1442-1453, 2016
5482016
Large-scale exome sequencing study implicates both developmental and functional changes in the neurobiology of autism
FK Satterstrom, JA Kosmicki, J Wang, MS Breen, S De Rubeis, JY An, ...
Cell 180 (3), 568-584. e23, 2020
2272020
DAWN: a framework to identify autism genes and subnetworks using gene expression and genetics
L Liu, J Lei, SJ Sanders, AJ Willsey, Y Kou, AE Cicek, L Klei, C Lu, X He, ...
Molecular autism 5 (1), 22, 2014
992014
Ensuring location diversity in privacy-preserving spatio-temporal data publishing
AE Cicek, ME Nergiz, Y Saygin
The VLDB journal 23 (4), 609-625, 2014
592014
Landscape of conditional eQTL in dorsolateral prefrontal cortex and co-localization with schizophrenia GWAS
A Dobbyn, LM Huckins, J Boocock, LG Sloofman, BS Glicksberg, ...
The American Journal of Human Genetics 102 (6), 1169-1184, 2018
572018
Metabolome profiling by HRMAS NMR spectroscopy of pheochromocytomas and paragangliomas detects SDH deficiency: clinical and pathophysiological implications
A Imperiale, FM Moussallieh, P Roche, S Battini, AE Cicek, F Sebag, ...
Neoplasia 17 (1), 55-65, 2015
472015
Metabolomics approaches in pancreatic adenocarcinoma: tumor metabolism profiling predicts clinical outcome of patients
S Battini, F Faitot, A Imperiale, AE Cicek, C Heimburger, G Averous, ...
BMC medicine 15 (1), 56, 2017
282017
A look-ahead approach to secure multiparty protocols
ME Nergiz, E Cicek, T Pedersen, Y Saygin
IEEE Transactions on Knowledge and Data Engineering 24 (7), 1170-1185, 2011
232011
Novel genes for autism implicate both excitatory and inhibitory cell lineages in risk
FK Satterstrom, JA Kosmicki, J Wang, MS Breen, S De Rubeis, JY An, ...
bioRxiv, 484113, 2018
222018
State
SJ Sanders, BM Neale, H Huang, DM Werling, JY An, S Dong, ...
MW, Willsey, AJ, Hyman, SE, Addington, AM, Lehner, T., Freimer, NB, andá…, 2017
212017
ADEMA: an algorithm to determine expected metabolite level alterations using mutual information
AE Cicek, I Bederman, L Henderson, ML Drumm, G Ozsoyoglu
PLoS Comput Biol 9 (1), e1002859, 2013
192013
Re-identification of individuals in genomic data-sharing beacons via allele inference
N von Thenen, E Ayday, AE Cicek
Bioinformatics 35 (3), 365-371, 2019
182019
DDD Study
S De Rubeis, X He, AP Goldberg, CS Poultney, K Samocha, AE Cicek, ...
Homozygosity Mapping Collaborative for Autism, 209-215, 0
15
Whole-genome and RNA sequencing reveal variation and transcriptomic coordination in the developing human prefrontal cortex
DM Werling, S Pochareddy, J Choi, JY An, B Sheppard, M Peng, Z Li, ...
Cell Reports 31 (1), 107489, 2020
142020
De novo ChIP-seq analysis
X He, AE Cicek, Y Wang, MH Schulz, HS Le, Z Bar-Joseph
Genome biology 16 (1), 205, 2015
132015
An online model composition tool for system biology models
SA Coskun, AE Cicek, N Lai, RK Dash, ZM Ozsoyoglu, G Ozsoyoglu
BMC systems biology 7 (1), 88, 2013
132013
A statistical framework for mapping risk genes from de novo mutations in whole-genome-sequencing studies
Y Liu, Y Liang, AE Cicek, Z Li, J Li, RA Muhle, M Krenzer, Y Mei, Y Wang, ...
The American Journal of Human Genetics 102 (6), 1031-1047, 2018
122018
PathCase-SB architecture and database design
A Cakmak, X Qi, SA Coskun, M Das, E Cheng, AE Cicek, N Lai, ...
BMC systems biology 5 (1), 188, 2011
122011
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Articles 1–20