Chaste: cancer, heart and soft tissue environment FR Cooper, RE Baker, MO Bernabeu, R Bordas, L Bowler, ... Journal of Open Source Software 5 (47), 2020 | 61 | 2020 |
Quantitative single-cell live imaging links HES5 dynamics with cell-state and fate in murine neurogenesis CS Manning, V Biga, J Boyd, J Kursawe, B Ymisson, DG Spiller, ... Nature communications 10 (1), 2835, 2019 | 53 | 2019 |
Transient aging in fractional Brownian and Langevin-equation motion J Kursawe, J Schulz, R Metzler Physical Review E 88 (6), 062124, 2013 | 51 | 2013 |
Capabilities and limitations of tissue size control through passive mechanical forces J Kursawe, PA Brodskiy, JJ Zartman, RE Baker, AG Fletcher PLoS computational biology 11 (12), e1004679, 2015 | 43 | 2015 |
Approximate Bayesian computation reveals the importance of repeated measurements for parameterising cell-based models of growing tissues J Kursawe, RE Baker, AG Fletcher Journal of theoretical biology 443, 66-81, 2018 | 36 | 2018 |
Impact of implementation choices on quantitative predictions of cell-based computational models J Kursawe, RE Baker, AG Fletcher Journal of Computational Physics 345, 752-767, 2017 | 34 | 2017 |
Half-explicit timestepping schemes on velocity level based on time-discontinuous Galerkin methods T Schindler, S Rezaei, J Kursawe, V Acary Computer Methods in Applied Mechanics and Engineering 290, 250-276, 2015 | 32 | 2015 |
Dynamic properties of noise and Her6 levels are optimized by miR‐9, allowing the decoding of the Her6 oscillator X Soto, V Biga, J Kursawe, R Lea, P Doostdar, R Thomas, N Papalopulu The EMBO Journal 39 (12), e103558, 2020 | 24 | 2020 |
A dynamic, spatially periodic, micro‐pattern of HES5 underlies neurogenesis in the mouse spinal cord V Biga, J Hawley, X Soto, E Johns, D Han, H Bennett, AD Adamson, ... Molecular Systems Biology 17 (5), e9902, 2021 | 14 | 2021 |
Robust cell tracking in epithelial tissues through identification of maximum common subgraphs J Kursawe, R Bardenet, JJ Zartman, RE Baker, AG Fletcher Journal of the Royal Society Interface 13 (124), 20160725, 2016 | 10 | 2016 |
Differential phase register of Hes1 oscillations with mitoses underlies cell-cycle heterogeneity in ER+ breast cancer cells N Sabherwal, A Rowntree, E Marinopoulou, T Pettini, S Hourihane, ... Proceedings of the National Academy of Sciences 118 (45), e2113527118, 2021 | 9 | 2021 |
Inferring kinetic parameters of oscillatory gene regulation from single cell time-series data J Burton, CS Manning, M Rattray, N Papalopulu, J Kursawe Journal of the Royal Society Interface 18 (182), 20210393, 2021 | 6 | 2021 |
Coupled differentiation and division of embryonic stem cells inferred from clonal snapshots LJ Ruske, J Kursawe, A Tsakiridis, V Wilson, AG Fletcher, RA Blythe, ... Physical Biology 17 (6), 065009, 2020 | 5 | 2020 |
Sequential and additive expression of miR-9 precursors control timing of neurogenesis X Soto, J Burton, CS Manning, T Minchington, R Lea, J Lee, J Kursawe, ... Development 149 (19), dev200474, 2022 | 3 | 2022 |
Quantitative, real-time, single cell analysis in tissue reveals expression dynamics of neurogenesis CS Manning, V Biga, J Boyd, J Kursawe, B Ymisson, DG Spiller, ... bioRxiv 10, 373407, 2018 | 3 | 2018 |
QuickStitch for seamless stitching of confocal mosaics through high-pass filtering and recursive normalization PA Brodskiy, PM Eberts, C Narciso, J Kursawe, A Fletcher, JJ Zartman bioRxiv, 075440, 2016 | 3 | 2016 |
miR-9 mediated noise optimization of the her6 oscillator is needed for cell state progression in the Zebrafish hindbrain X Soto, V Biga, J Kursawe, R Lea, P Doostdar, N Papalopulu bioRxiv, 608604, 2019 | 1 | 2019 |
Simulating BRAFV600E-MEK-ERK signalling dynamics in response to vertical inhibition treatment strategies A De Carli, Y Kapelyukh, J Kursawe, MAJ Chaplain, CR Wolf, S Hamis bioRxiv, 2023.12. 12.571169, 2023 | | 2023 |
Contributions of cell behavior to geometric order in embryonic cartilage S Mathias, I Adameyko, A Hellander, J Kursawe PLOS Computational Biology 19 (11), e1011658, 2023 | | 2023 |
Timing of neurogenesis through sequential accumulation of miR-9 due to additive expression of multiple alleles X Soto, J Burton, C Manning, T Minchington, R Lea, J Lee, J Kursawe, ... bioRxiv, 2020.08. 03.233890, 2020 | | 2020 |