| De novo design of protein interactions with learned surface fingerprints P Gainza, S Wehrle, A Van Hall-Beauvais, A Marchand, A Scheck, ... Nature 617 (7959), 176-184, 2023 | 74 | 2023 |
| De novo protein design by inversion of the AlphaFold structure prediction network CA Goverde, B Wolf, H Khakzad, S Rosset, BE Correia Protein Science 32 (6), e4653, 2023 | 24 | 2023 |
| An atlas of protein homo-oligomerization across domains of life H Schweke, M Pacesa, T Levin, CA Goverde, P Kumar, Y Duhoo, ... Cell, 2024 | 20 | 2024 |
| A new age in protein design empowered by deep learning H Khakzad, I Igashov, A Schneuing, C Goverde, M Bronstein, B Correia Cell Systems 14 (11), 925-939, 2023 | 12 | 2023 |
| De novo design of site-specific protein interactions with learned surface fingerprints P Gainza, S Wehrle, A Van Hall-Beauvais, A Marchand, A Scheck, ... bioRxiv, 2022.06. 16.496402, 2022 | 6 | 2022 |
| Computational design of soluble functional analogues of integral membrane proteins CA Goverde, M Pacesa, N Goldbach, LJ Dornfeld, PEM Balbi, ... bioRxiv, 2023.05. 09.540044, 2023 | 5 | 2023 |
| Exploring" dark matter" protein folds using deep learning Z Harteveld, A Van Hall-Beauvais, I Morozova, J Southern, CA Goverde, ... bioRxiv, 2023.08. 30.555621, 2023 | 3 | 2023 |
| AF2BIND: Predicting ligand-binding sites using the pair representation of AlphaFold2 A Gazizov, A Lian, CA Goverde, S Ovchinnikov, NF Polizzi bioRxiv, 2023.10. 15.562410, 2023 | 2 | 2023 |
| Opportunities and challenges in design and optimization of protein function D Listov, CA Goverde, BE Correia, SJ Fleishman Nature Reviews Molecular Cell Biology, 1-15, 2024 | 1 | 2024 |
| Structures of the Foamy virus fusion protein reveal an unexpected link with the F protein of paramyxo-and pneumoviruses I Fernandez, F Bontems, D Brun, Y Coquin, CA Goverde, BE Correia, ... bioRxiv, 2024.02. 09.579661, 2024 | 1 | 2024 |
| Machine Learning in Protein Science De Novo Design of Site-Specific Protein Binders Using Surface Fingerprints V Hall-Beauvais, P Gainza, S Wehrle, A Scheck, A Marchand, Z Harteveld, ... Protein Science 32, 2023 | | 2023 |
| De novo design of site-specific protein interactions with learned surface fingerprints (preprint) P Gainza, S Wehrle, A Van Hall-Beauvais, A Marchand, A Scheck, ... | | 2022 |
| LPDI J Bonet Martinez, SM Buckley, KM Castro Gilabert, RM Chassot, ... | | |
