Ali Cakmak
Ali Cakmak
Assoc. Prof. of Computer Science, Istanbul Technical University
Verified email at - Homepage
Cited by
Cited by
PathCase: pathways database system
B Elliott, M Kirac, A Cakmak, G Yavas, S Mayes, E Cheng, Y Wang, ...
Bioinformatics 24 (21), 2526-2533, 2008
High impact academic paper prediction using temporal and topological features
F Davletov, AS Aydin, A Cakmak
Proceedings of the 23rd ACM international conference on conference on …, 2014
Mining biological networks for unknown pathways
A Cakmak, G Ozsoyoglu
Bioinformatics 23 (20), 2775-2783, 2007
Taxonomy-superimposed graph mining
A Cakmak, G Ozsoyoglu
Proceedings of the 11th international conference on Extending database …, 2008
Context-based literature digital collection search
N Ratprasartporn, J Po, A Cakmak, S Bani-Ahmad, G Ozsoyoglu
The VLDB Journal 18, 277-301, 2009
Evaluating Publication Similarity Measures.
S Bani-Ahmad, A Cakmak, G Özsoyoglu, A Al-Hamdani
IEEE Data Eng. Bull. 28 (4), 21-28, 2005
Computational Modeling of Pass Effectiveness in Soccer
A Cakmak, A Uzun, E Delibas
Advances in Complex Systems 21 (3-4), 2018
PathCase-SB architecture and database design
A Cakmak, X Qi, SA Coskun, M Das, E Cheng, AE Cicek, N Lai, ...
BMC systems biology 5, 1-17, 2011
Annotating genes using textual patterns
A Cakmak, G Ozsoyoglu
Biocomputing 2007, 221-232, 2007
Benchmarking Apache Spark and Hadoop MapReduce on Big Data Classification
T Tekdogan, A Cakmak
International Conference on Cloud and Big Data Computing (ICCBDC), 15-20, 2021
Predicting student success in courses via collaborative filtering
A Cakmak
International Journal of Intelligent Systems and Applications in Engineering …, 2017
A new metabolomics analysis technique: steady-state metabolic network dynamics analysis
A Cakmak, X Qi, AE Cicek, I Bederman, L Henderson, M Drumm, ...
Journal of bioinformatics and computational biology 10 (01), 1240003, 2012
Discovering gene annotations in biomedical text databases
A Cakmak, G Ozsoyoglu
BMC bioinformatics 9, 1-17, 2008
Gene ontology-based annotation analysis and categorization of metabolic pathways
A Cakmak, M Kirac, MR Reynolds, ZM Ozsoyoglu, G Ozsoyoglu
19th International Conference on Scientific and Statistical Database …, 2007
Interactive Exploratory Soccer Data Analytics
E Delibas, A Uzun, MF Inan, O Guzey, A Cakmak
INFOR: Information Systems and Operational Research 57 (2), 141-164, 2019
Creating and using data that indicates misestimates of actual costs
SP Chakkappen, M Zait, AW Lee, A Cakmak
US Patent 9,471,631, 2016
An online system for metabolic network analysis
AE Cicek, X Qi, A Cakmak, SR Johnson, X Han, S Alshalwi, ...
Database 2014, 2014
PathCase-SB: integrating data sources and providing tools for systems biology research
SA Coskun, X Qi, A Cakmak, E Cheng, AE Cicek, L Yang, R Jadeja, ...
BMC systems biology 6, 1-20, 2012
Analyzing metabolite measurements for automated prediction of underlying biological mechanisms
A Cakmak, A Dsouza, RW Hanson, M Ozsoyoglu
Proceedings of the First ACM International Conference on Bioinformatics and …, 2010
Evaluating score and publication similarity functions in digital libraries
S Bani-Ahmad, A Cakmak, A Al-Hamdani, G Ozsoyoglu
Digital Libraries: Implementing Strategies and Sharing Experiences: 8th …, 2005
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