| pathfindR: An R Package for Comprehensive Identification of Enriched Pathways in Omics Data Through Active Subnetworks E Ulgen, O Ozisik, OU Sezerman Frontiers in Genetics 10, 858, 2019 | 341 | 2019 |
| pathfindR: An R Package for Pathway Enrichment Analysis Utilizing Active Subnetworks E Ulgen, O Ozisik, OU Sezerman bioRxiv, 272450, 2018 | 28 | 2018 |
| Supervised Machine Learning Algorithms for Evaluation of Solid Lipid Nanoparticles and Particle Size AA Öztürk, AB Gündüz, O Ozisik Combinatorial chemistry & high throughput screening 21 (9), 693-699, 2018 | 26 | 2018 |
| Comparison of MRI, PSMA PET/CT, and fusion PSMA PET/MRI for detection of clinically significant prostate cancer A Arslan, E Karaarslan, AL Güner, Y Sağlıcan, MB Tuna, O Özışık, ... Journal of computer assisted tomography 45 (2), 210-217, 2021 | 20 | 2021 |
| An occupancy grid based SLAM method O Ozisik, S Yavuz 2008 IEEE International Conference on Computational Intelligence for …, 2008 | 20 | 2008 |
| Active Subnetwork GA: A Two Stage Genetic Algorithm Approach to Active Subnetwork Search O Ozisik, B Bakir-Gungor, B Diri, OU Sezerman Current Bioinformatics 12 (4), 320 - 328, 2017 | 13 | 2017 |
| orsum: a Python package for filtering and comparing enrichment analyses using a simple principle O Ozisik, M Térézol, A Baudot BMC bioinformatics 23 (1), 293, 2022 | 11 | 2022 |
| Progesterone at high doses reduces the growth of U87 and A172 glioblastoma cells: Proteomic changes regarding metabolism and immunity MA Altinoz, Y Ucal, MC Yilmaz, İ Kiris, O Ozisik, U Sezerman, A Ozpinar, ... Cancer Medicine 9, 5767-5780, 2020 | 10 | 2020 |
| Overlap of vitamin A and vitamin D target genes with CAKUT-related processes O Ozisik, F Ehrhart, CT Evelo, A Mantovani, A Baudot F1000Research 10, 395, 2022 | 8 | 2022 |
| Impact of Refractive Errors on Da Vinci SI Robotic System MB Tuna, AE Kilavuzoglu, P Mourmouris, OB Argun, T Doganca, C Obek, ... JSLS: Journal of the Society of Laparoscopic & Robotic Surgeons 24 (3), 2020 | 5 | 2020 |
| Simultaneous localization and mapping with limited sensing using extended kalman filter and hough transform O Özışık, S Yavuz Tehnicki vjesnik-Technical Gazette 23, 2016 | 5 | 2016 |
| PANACEA: network-based methods for pharmacotherapy prioritization in personalized oncology E Ulgen, O Ozisik, OU Sezerman Bioinformatics 39 (1), btad022, 2023 | 3 | 2023 |
| A genetic algorithm approach to active subnetwork search applied to GWAS data O Ozisik, B Bakir-Gungor, B Diri, OU Sezerman Health Informatics and Bioinformatics (HIBIT), 2013 8th International …, 2013 | 3 | 2013 |
| Fuzzy-Neural Robot Controller for Unknown Environment Exploration O Özışık, S Yavuz International Fuzzy Systems Symposium, 2009 | 2 | 2009 |
| PSAP‐Genomic‐Regions: A Method Leveraging Population Data to Prioritize Coding and Non‐Coding Variants in Whole Genome Sequencing for Rare Disease Diagnosis MSC Ogloblinsky, O Bocher, C Aloui, AL Leutenegger, O Ozisik, A Baudot, ... Genetic Epidemiology, 2024 | | 2024 |
| Integrative analysis of multi-omics data reveals importance of collagen and the PI3K AKT signalling pathway in CAKUT JR Bayjanov, C Doornbos, O Ozisik, W Shin, N Queralt-Rosinach, ... Scientific Reports 14 (1), 20731, 2024 | | 2024 |
| The molecular landscape of premature aging diseases defined by multilayer network exploration C Beust, A Valdeolivas, A Baptista, G Brière, N Lévy, O Ozisik, A Baudot Advanced Biology, 2400134, 2024 | | 2024 |
| System-level analysis of genes mutated in muscular dystrophies reveals a functional pattern associated with muscle weakness distribution O Ozisik, S Gorokhova, M Cerino, M Bartoli, A Baudot Scientific Reports 14 (1), 11225, 2024 | | 2024 |
| ODAMNet: a Python package to identify molecular relationships between chemicals and rare diseases using overlap, active module and random walk approaches M Térézol, A Baudot, O Ozisik SoftwareX 26, 101701, 2024 | | 2024 |
| Multi-omics analysis in inclusion body myositis identifies mir-16 responsible for HLA overexpression D Wijnbergen, M Johari, O Ozisik, P AC't Hoen, F Ehrhart, A Baudot, ... | | 2024 |
