| ImaGene: a convolutional neural network to quantify natural selection from genomic data L Torada, L Lorenzon, A Beddis, U Isildak, L Pattini, S Mathieson, ... BMC bioinformatics 20, 1-12, 2019 | 85 | 2019 |
| Temporal changes in the gene expression heterogeneity during brain development and aging U Işıldak, M Somel, JM Thornton, HM Dönertaş Scientific reports 10 (1), 1-15, 2020 | 46 | 2020 |
| Distinguishing between recent balancing selection and incomplete sweep using deep neural networks U Isildak, A Stella, M Fumagalli Molecular Ecology Resources 21 (8), 2706-2718, 2021 | 34 | 2021 |
| On the limits of fitting complex models of population history to f-statistics R Maier, P Flegontov, O Flegontova, U Isildak, P Changmai, D Reich Elife 12, e85492, 2023 | 33 | 2023 |
| Inter-tissue convergence of gene expression during ageing suggests age-related loss of tissue and cellular identity H Izgi, DD Han, U Isildak, S Huang, E Kocabiyik, P Khaitovich, M Somel, ... Elife 11, e68048, 2022 | 31 | 2022 |
| Peopling the Landscape of Çatalhöyük: Reports from the 2009-2017 Seasons I Hodder Peopling the Landscape of Çatalhöyük, 1-200, 2020 | 6 | 2020 |
| Modeling of African population history using f-statistics is biased when applying all previously proposed SNP ascertainment schemes P Flegontov, U Işıldak, R Maier, E Yüncü, P Changmai, D Reich PLoS genetics 19 (9), e1010931, 2023 | 5* | 2023 |
| False discovery rates of qpAdm-based screens for genetic admixture E Yüncü, U Işıldak, MP Williams, CD Huber, O Flegontova, LA Vyazov, ... bioRxiv, 2023.04. 25.538339, 2023 | 3 | 2023 |
| Somatic copy number variant load in neurons of healthy controls and Alzheimer’s disease patients ZG Turan, V Richter, J Bochmann, P Parvizi, E Yapar, U Işıldak, ... Acta Neuropathologica Communications 10 (1), 2022 | 3 | 2022 |
| Evolutionary paths to mammalian longevity through the lens of gene expression U Işıldak, HM Dönertaş The EMBO Journal 42 (17), e114879, 2023 | | 2023 |
| Convolutional Neural Networks for Classification of Colorectal Cancer on Whole Slide Images MA Temena, U Isildak, A Acar | | 2021 |
