Ronald Koder
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Design and engineering of an O 2 transport protein
RL Koder, JLR Anderson, LA Solomon, KS Reddy, CC Moser, PL Dutton
Nature 458 (7236), 305-309, 2009
Designing artificial enzymes by intuition and computation
V Nanda, RL Koder
Nature chemistry 2 (1), 15-24, 2010
Structures of nitroreductase in three states effects of inhibitor binding and reduction
CA Haynes, RL Koder, AF Miller, DW Rodgers
Journal of Biological Chemistry 277 (13), 11513-11520, 2002
Steady-state kinetic mechanism, stereospecificity, substrate and inhibitor specificity of Enterobacter cloacae nitroreductase
RL Koder, AF Miller
Biochimica et Biophysica Acta (BBA)-Protein Structure and Molecular …, 1998
Flavin thermodynamics explain the oxygen insensitivity of enteric nitroreductases
RL Koder, CA Haynes, ME Rodgers, DW Rodgers, AF Miller
Biochemistry 41 (48), 14197-14205, 2002
The HP-1 maquette: from an apoprotein structure to a structured hemoprotein designed to promote redox-coupled proton exchange
SS Huang, RL Koder, M Lewis, AJ Wand, PL Dutton
Proceedings of the National Academy of Sciences 101 (15), 5536-5541, 2004
Quantitative structure–activity relationships in two-electron reduction of nitroaromatic compounds by Enterobacter cloacae NAD (P) H: nitroreductase
H Nivinskas, RL Koder, Ž Anusevičius, J Šarlauskas, AF Miller, ...
Archives of biochemistry and biophysics 385 (1), 170-178, 2001
Mutational and spectroscopic studies of the significance of the active site glutamine to metal ion specificity in superoxide dismutase
AL Schwartz, E Yikilmaz, CK Vance, S Vathyam, RL Koder, AF Miller
Journal of Inorganic Biochemistry 80 (3-4), 247-256, 2000
Intelligent design: the de novo engineering of proteins with specified functions
RL Koder, PL Dutton
Dalton Transactions, 3045-3051, 2006
Hydrophilic to amphiphilic design in redox protein maquettes
BM Discher, RL Koder, CC Moser, PL Dutton
Current opinion in chemical biology 7 (6), 741-748, 2003
Nativelike structure in designed four α-helix bundles driven by buried polar interactions
RL Koder, KG Valentine, J Cerda, D Noy, KM Smith, AJ Wand, PL Dutton
Journal of the American Chemical Society 128 (45), 14450-14451, 2006
Two-electron reduction of quinones by Enterobacter cloacae NAD (P) H: nitroreductase: quantitative structure-activity relationships
H Nivinskas, S Staškevičien, J Šarlauskas, RL Koder, AF Miller, ...
Archives of biochemistry and biophysics 403 (2), 249-258, 2002
Computational Design of Thermostabilizing d-Amino Acid Substitutions
A Rodriguez-Granillo, S Annavarapu, L Zhang, RL Koder, V Nanda
Journal of the American Chemical Society 133 (46), 18750-18759, 2011
De Novo Self-Assembling Collagen Heterotrimers Using Explicit Positive and Negative Design
F Xu, L Zhang, RL Koder, V Nanda
Biochemistry 49 (11), 2307-2316, 2010
Overexpression, Isotopic Labeling, and Spectral Characterization ofEnterobacter cloacaeNitroreductase
RL Koder, AF Miller
Protein expression and purification 13 (1), 53-60, 1998
Two-electron reduction of nitroaromatic compounds by Enterobacter cloacae NAD (P) H nitroreductase: description of quantitative structure-activity relationships.
H Nivinskas, RL Koder, Z Anusevicius, J Sarlauskas, AF Miller, N Cenas
Acta Biochimica Polonica 47 (4), 941-949, 2000
Geometric constraints for porphyrin binding in helical protein binding sites
C Negron, C Fufezan, RL Koder
Proteins: Structure, Function, and Bioinformatics 74 (2), 400-416, 2009
Design principles for chlorophyll‐binding sites in helical proteins
P Braun, E Goldberg, C Negron, M Von Jan, F Xu, V Nanda, RL Koder, ...
Proteins: Structure, Function, and Bioinformatics 79 (2), 463-476, 2011
Controlling complexity and water penetration in functional de novo protein design
JLR Anderson, RL Koder, CC Moser, PL Dutton
Biochemical Society Transactions 36 (6), 1106-1111, 2008
Rational design of a zinc phthalocyanine binding protein
AC Mutter, JA Norman, MT Tiedemann, S Singh, S Sha, S Morsi, I Ahmed, ...
Journal of structural biology 185 (2), 178-185, 2014
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