| Halogen bonds in biological molecules P Auffinger, FA Hays, E Westhof, PS Ho Proceedings of the National Academy of Sciences 101 (48), 16789-16794, 2004 | 1738 | 2004 |
| Encyclopedia of computational chemistry PR Schleyer (No Title), 1998 | 465 | 1998 |
| Water and ion binding around RNA and DNA (C, G) oligomers P Auffinger, E Westhof Journal of molecular biology 300 (5), 1113-1131, 2000 | 308 | 2000 |
| Simulations of the molecular dynamics of nucleic acids P Auffinger, E Westhof Current Opinion in Structural Biology 8 (2), 227-236, 1998 | 200 | 1998 |
| Spontaneous formation of KCl aggregates in biomolecular simulations: a force field issue? P Auffinger, TE Cheatham, AC Vaiana Journal of Chemical Theory and Computation 3 (5), 1851-1859, 2007 | 194 | 2007 |
| RNA hydration: three nanoseconds of multiple molecular dynamics simulations of the solvated tRNAAsp anticodon hairpin P Auffinger, E Westhof Journal of molecular biology 269 (3), 326-341, 1997 | 185 | 1997 |
| Rules governing the orientation of the 2′-hydroxyl group in RNA P Auffinger, E Westhof Journal of molecular biology 274 (1), 54-63, 1997 | 179 | 1997 |
| Nucleic acid solvation: from outside to insight P Auffinger, Y Hashem Current Opinion in Structural Biology 17 (3), 325-333, 2007 | 142 | 2007 |
| Water and ion binding around r (UpA) 12and d (TpA) 12Oligomers-comparison with RNA and DNA (CpG) 12 duplexes P Auffinger, E Westhof Journal of Molecular Biology 305 (5), 1057-1072, 2001 | 134 | 2001 |
| Singly and bifurcated hydrogen-bonded base-pairs in tRNA anticodon hairpins and ribozymes P Auffinger, E Westhof Journal of molecular biology 292 (3), 467-483, 1999 | 130 | 1999 |
| Anion binding to nucleic acids P Auffinger, L Bielecki, E Westhof Structure 12 (3), 379-388, 2004 | 128 | 2004 |
| Calculations of nucleic acid conformations S Louise-May, P Auffinger, E Westhof Current opinion in structural biology 6 (3), 289-298, 1996 | 119 | 1996 |
| Metal ion binding to RNA P Auffinger, N Grover, E Westhof | 107 | 2011 |
| The Mg2+ binding sites of the 5S rRNA loop E motif as investigated by molecular dynamics simulations P Auffinger, L Bielecki, E Westhof Chemistry & Biology 10 (6), 551-561, 2003 | 107 | 2003 |
| Multiple molecular dynamics simulations of the anticodon loop of tRNAAsp in aqueous solution with counterions P Auffinger, S Louise-May, E Westhof Journal of the American Chemical Society 117 (25), 6720-6726, 1995 | 107 | 1995 |
| Symmetric K+ and Mg2+ ion-binding sites in the 5 S rRNA loop E inferred from molecular dynamics simulations P Auffinger, L Bielecki, E Westhof Journal of molecular biology 335 (2), 555-571, 2004 | 106 | 2004 |
| Molecular Dynamics Simulations of the Anticodon Hairpin of tRNAAsp: Structuring Effects of C−H···O Hydrogen Bonds and of Long-Range Hydration Forces P Auffinger, S Louise-May, E Westhof Journal of the American Chemical Society 118 (5), 1181-1189, 1996 | 98 | 1996 |
| A molecular dynamics simulation study of an aminoglycoside/A-site RNA complex: conformational and hydration patterns AC Vaiana, E Westhof, P Auffinger Biochimie 88 (8), 1061-1073, 2006 | 95 | 2006 |
| An extended structural signature for the tRNA anticodon loop. P Auffinger, E Westhof Rna 7 (3), 334-341, 2001 | 95 | 2001 |
| H-bond stability in the tRNA (Asp) anticodon hairpin: 3 ns of multiple molecular dynamics simulations P Auffinger, E Westhof Biophysical journal 71 (2), 940-954, 1996 | 95 | 1996 |
