| Expanded encyclopaedias of DNA elements in the human and mouse genomes JE Moore, MJ Purcaro, HE Pratt, CB Epstein, N Shoresh, J Adrian, T Kawli, ... Nature 583 (7818), 699-710, 2020 | 1353 | 2020 |
| Integrative detection and analysis of structural variation in cancer genomes JR Dixon, J Xu, V Dileep, Y Zhan, F Song, VT Le, GG Yardımcı, ... Nature genetics 50 (10), 1388-1398, 2018 | 339 | 2018 |
| The HoxD cluster is a dynamic and resilient TAD boundary controlling the segregation of antagonistic regulatory landscapes E Rodríguez-Carballo, L Lopez-Delisle, Y Zhan, PJ Fabre, L Beccari, ... Genes & development 31 (22), 2264-2281, 2017 | 178 | 2017 |
| A chromosome folding intermediate at the condensin-to-cohesin transition during telophase K Abramo, AL Valton, SV Venev, H Ozadam, AN Fox, J Dekker Nature cell biology 21 (11), 1393-1402, 2019 | 168 | 2019 |
| Measuring the reproducibility and quality of Hi-C data GG Yardimci, H Ozadam, MEG Sauria, O Ursu, KK Yan, T Yang, ... Genome biology 20 (57), 188755, 2019 | 167* | 2019 |
| Systematic evaluation of chromosome conformation capture assays B Akgol Oksuz, L Yang, S Abraham, SV Venev, N Krietenstein, KM Parsi, ... Nature methods 18 (9), 1046-1055, 2021 | 150 | 2021 |
| The non-canonical SMC protein SmcHD1 antagonises TAD formation and compartmentalisation on the inactive X chromosome MR Gdula, TB Nesterova, G Pintacuda, J Godwin, Y Zhan, H Ozadam, ... Nature communications 10 (1), 30, 2019 | 108 | 2019 |
| Transcriptional silencers in Drosophila serve a dual role as transcriptional enhancers in alternate cellular contexts SS Gisselbrecht, A Palagi, JV Kurland, JM Rogers, H Ozadam, Y Zhan, ... Molecular cell 77 (2), 324-337. e8, 2020 | 104 | 2020 |
| An optimized kit-free method for making strand-specific deep sequencing libraries from RNA fragments MJM Erin E Heyer, Hakan Ozadam, Emiliano P Ricci, Can Cenik Nucleic acids research 43 (1), e2-e2, 2015 | 68 | 2015 |
| Higher-order organization principles of pre-translational mRNPs M Metkar, H Ozadam, BR Lajoie, M Imakaev, LA Mirny, J Dekker, ... Molecular cell 72 (4), 715-726. e3, 2018 | 64 | 2018 |
| Polycyclic codes over Galois rings with applications to repeated-root constacyclic codes SR López-Permouth, H Özadam, F Özbudak, S Szabo Finite Fields and Their Applications 19 (1), 16-38, 2013 | 54 | 2013 |
| Genes with 5′ terminal oligopyrimidine tracts preferentially escape global suppression of translation by the SARS-CoV-2 Nsp1 protein S Rao, I Hoskins, T Tonn, PD Garcia, H Ozadam, ES Cenik, C Cenik Rna 27 (9), 1025-1045, 2021 | 52 | 2021 |
| ASPeak: an abundance sensitive peak detection algorithm for RIP-Seq A Kucukural, H Özadam, G Singh, MJ Moore, C Cenik Bioinformatics 29 (19), 2485-2486, 2013 | 46 | 2013 |
| Transcriptome-wide interrogation of the functional intronome by spliceosome profiling W Chen, J Moore, H Ozadam, HP Shulha, N Rhind, Z Weng, MJ Moore Cell 173 (4), 1031-1044. e13, 2018 | 40 | 2018 |
| RiboFlow, RiboR and RiboPy: an ecosystem for analyzing ribosome profiling data at read length resolution H Ozadam, M Geng, C Cenik Bioinformatics 36 (9), 2929-2931, 2020 | 33 | 2020 |
| Single-cell quantification of ribosome occupancy in early mouse development H Ozadam, T Tonn, CM Han, A Segura, I Hoskins, S Rao, V Ghatpande, ... Nature 618 (7967), 1057-1064, 2023 | 31 | 2023 |
| The Minimum Hamming Distance of Cyclic Codes of Length 2ps H Özadam, F Özbudak International Symposium on Applied Algebra, Algebraic Algorithms, and Error …, 2009 | 29 | 2009 |
| Secret sharing schemes and linear codes H Özadam, F Özbudak, Z Saygı null, 2007 | 18 | 2007 |
| Large domains of heterochromatin direct the formation of short mitotic chromosome loops MH Fitz-James, P Tong, AL Pidoux, H Ozadam, L Yang, SA White, ... Elife 9, e57212, 2020 | 13 | 2020 |
| A NOTE ON NEGACYCLIC AND CYCLIC CODES OF LENGTH p (s) OVER A FINITE FIELD OF CHARACTERISTIC p H Özadam, F Özbudak American Institute of Mathematical Sciences (AIMS), 2009 | 11 | 2009 |
Job DekkerUniversity of Massachusetts Medical School, Howard Hughes Medical InstituteVerified email at umassmed.edu
