Xingqi Chen, PhD, Assistant Professor
Xingqi Chen, PhD, Assistant Professor
Department of Immunology, Genetics and pathology, Uppsala University, Sweden
Verified email at igp.uu.se - Homepage
Title
Cited by
Cited by
Year
Sensing self and foreign circular RNAs by intron identity
YG Chen, MV Kim, X Chen, PJ Batista, S Aoyama, JE Wilusz, A Iwasaki, ...
Molecular cell 67 (2), 228-238. e5, 2017
1762017
ATAC-see reveals the accessible genome by transposase-mediated imaging and sequencing.
HYC Xingqi Chen, Ying Shen, Will Draper, Jason D Buenrostro, Ulrike ...
Nature Methods, 2016
1002016
PARP1-and CTCF-mediated interactions between active and repressed chromatin at the lamina promote oscillating transcription
H Zhao, EG Sifakis, N Sumida, L Millán-Arińo, BA Scholz, JP Svensson, ...
Molecular cell 59 (6), 984-997, 2015
962015
Circular ecDNA promotes accessible chromatin and high oncogene expression
S Wu, KM Turner, N Nguyen, R Raviram, M Erb, J Santini, J Luebeck, ...
Nature 575 (7784), 699-703, 2019
732019
Activation of PDGF pathway links LMNA mutation to dilated cardiomyopathy
J Lee, V Termglinchan, S Diecke, I Itzhaki, CK Lam, P Garg, E Lau, ...
Nature 572 (7769), 335-340, 2019
382019
Joint single-cell DNA accessibility and protein epitope profiling reveals environmental regulation of epigenomic heterogeneity
WJGHYC Xingqi Chen, Ulrike M. Litzenburger, Yuning Wei, Alicia N. Schep ...
Nature communications 9 (9, Article number: 4590 (2018)), 2018
352018
Transposase-mediated imaging of the accessible genome
HY Chang, WJ Greenleaf, C Xingqi, J Buenrostro
222017
Phytohemagglutinin improves efficiency of electrofusing mammary gland epithelial cells into oocytes in goats
YL Zhang, FJ Liu, DQ Sun, XQ Chen, Y Zhang, YM Zheng, MT Zhao, ...
Theriogenology 69 (9), 1165-1171, 2008
182008
The visualization of large organized chromatin domains enriched in the H3K9me2 mark within a single chromosome in a single cell
X Chen, S Yammine, C Shi, M Tark-Dame, A Göndör, R Ohlsson
Epigenetics 9 (11), 1439-1445, 2014
162014
Chromatin in situ proximity (ChrISP): Single-cell analysis of chromatin proximities at a high resolution
X Chen, C Shi, S Yammine, A Göndör, D Rönnlund, ...
Biotechniques 56 (3), 117-124, 2014
152014
3D ATAC-PALM: super-resolution imaging of the accessible genome
L Xie, P Dong, X Chen, THS Hsieh, S Banala, M De Marzio, BP English, ...
Nature methods 17 (4), 430-436, 2020
72020
Super-resolution imaging reveals 3D structure and organizing mechanism of accessible chromatin
L Xie, P Dong, Y Qi, M De Marzio, X Chen, S Banala, WR Legant, ...
bioRxiv, 678649, 2019
62019
Construction of universal vector for gene targeting and analysis of its function
X Chen, D Sun, F Liu, S Jia, Y Zhang
Sheng wu gong cheng xue bao= Chinese journal of biotechnology 24 (10), 1818-1823, 2008
32008
A primed immune transcriptional program is activated in oligodendroglia in multiple sclerosis
M Meijer, E Agirre, M Kabbe, C van Tuijn, A Heskol, AM Falcăo, ...
bioRxiv, 2020
12020
Super enhancers—Functional cores under the 3D genome
J Zhang, W Yue, Y Zhou, M Liao, X Chen, J Hua
Cell Proliferation 54 (2), e12970, 2021
2021
Conserved cell-lineage controlled epigenetic regulation in human and mouse glioblastoma stem cells determines functionally distinct subgroups
XC Xi Lu, Naga Prathyusha Maturi, Malin Jarvius, Linxuan Zhao, Yuan Xie, E ...
bioRxiv, 2021
2021
Identification and characterization of the hypoxia response regulatory elements in the accessible genome
X Chen
bioRxiv, 2020
2020
In Situ Imaging of Spatial Organization of Accessible Chromatin at the Nanoscale with ATAC-see and Single-Molecule Super-Resolution Fluorescence Microscopy
MY Lee, X Chen, AK Gustavsson, HY Chang, WE Moerner
Biophysical Journal 114 (3), 539a, 2018
2018
H3K9 methylation fine-tunes coordination of transcription by regulating chromatin conformation plasticity
X Chen, S Yammine, N Sumida, A Fernandez-Woodbridge, C Shi, ...
CHROMOSOME RESEARCH 23 (2), 359-360, 2015
2015
Dynamics of higher order chromatin structures
X Chen
Inst för mikrobiologi, tumör-och cellbiologi/Dept of Microbiology, Tumor and …, 2014
2014
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Articles 1–20