Fan Li
Fan Li
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Association between breast milk bacterial communities and establishment and development of the infant gut microbiome
PS Pannaraj, F Li, C Cerini, JM Bender, S Yang, A Rollie, H Adisetiyo, ...
JAMA pediatrics 171 (7), 647-654, 2017
Meta-analysis of effects of exclusive breastfeeding on infant gut microbiota across populations
NT Ho, F Li, KA Lee-Sarwar, HM Tun, BP Brown, PS Pannaraj, JM Bender, ...
Nature communications 9 (1), 1-13, 2018
Genome-wide double-stranded RNA sequencing reveals the functional significance of base-paired RNAs in Arabidopsis
Q Zheng, P Ryvkin, F Li, I Dragomir, O Valladares, J Yang, K Cao, ...
PLoS Genet 6 (9), e1001141, 2010
Global analysis of RNA secondary structure in two metazoans
F Li, Q Zheng, P Ryvkin, I Dragomir, Y Desai, S Aiyer, O Valladares, ...
Cell reports 1 (1), 69-82, 2012
Regulatory impact of RNA secondary structure across the Arabidopsis transcriptome
F Li, Q Zheng, LE Vandivier, MR Willmann, Y Chen, BD Gregory
The Plant Cell 24 (11), 4346-4359, 2012
Essential Role for endogenous siRNAs during meiosis in mouse oocytes
P Stein, NV Rozhkov, F Li, FL Cárdenas, O Davydenk, LE Vandivier, ...
PLoS Genet 11 (2), e1005013, 2015
Transformation of the intestinal epithelium by the MSI2 RNA-binding protein
S Wang, N Li, M Yousefi, A Nakauka-Ddamba, F Li, K Parada, S Rao, ...
Nature communications 6 (1), 1-15, 2015
RNase-mediated protein footprint sequencing reveals protein-binding sites throughout the human transcriptome
IM Silverman, F Li, A Alexander, L Goff, C Trapnell, JL Rinn, BD Gregory
Genome biology 15 (1), 1-16, 2014
Identification of potential pathway mediation targets in Toll-like receptor signaling
F Li, I Thiele, N Jamshidi, BØ Palsson
PLoS Comput Biol 5 (2), e1000292, 2009
The Msi family of RNA-binding proteins function redundantly as intestinal oncoproteins
N Li, M Yousefi, A Nakauka-Ddamba, F Li, L Vandivier, K Parada, ...
Cell reports 13 (11), 2440-2455, 2015
Maternal HIV infection influences the microbiome of HIV-uninfected infants
JM Bender, F Li, S Martelly, E Byrt, V Rouzier, M Leo, N Tobin, ...
Science Translational Medicine 8 (349), 349ra100-349ra100, 2016
Paternal poly (ADP-ribose) metabolism modulates retention of inheritable sperm histones and early embryonic gene expression
M Ihara, ML Meyer-Ficca, NA Leu, S Rao, F Li, BD Gregory, IA Zalenskaya, ...
PLoS Genet 10 (5), e1004317, 2014
Genomic era analyses of RNA secondary structure and RNA-binding proteins reveal their significance to post-transcriptional regulation in plants
IM Silverman, F Li, BD Gregory
Plant science 205, 55-62, 2013
The T-ALL related gene BCL11B regulates the initial stages of human T-cell differentiation
VL Ha, A Luong, F Li, D Casero, J Malvar, YM Kim, R Bhatia, GM Crooks, ...
Leukemia 31 (11), 2503-2514, 2017
Analysis of the host transcriptome from demyelinating spinal cord of murine coronavirus-infected mice
R Elliott, F Li, I Dragomir, MMW Chua, BD Gregory, SR Weiss
PLoS One 8 (9), e75346, 2013
Autophagic UVRAG promotes UV-induced photolesion repair by activation of the CRL4DDB2 E3 ligase
Y Yang, S He, Q Wang, F Li, MJ Kwak, S Chen, D O’Connell, T Zhang, ...
Molecular cell 62 (4), 507-519, 2016
Quantification of variation and the impact of biomass in targeted 16S rRNA gene sequencing studies
JM Bender, F Li, H Adisetiyo, D Lee, S Zabih, L Hung, TA Wilkinson, ...
Microbiome 6 (1), 1-12, 2018
Effects of Substance Use and Sex Practices on the Intestinal Microbiome During HIV-1 Infection
JA Fulcher, SK Hussain, R Cook, F Li, NH Tobin, A Ragsdale, S Shoptaw, ...
The Journal of infectious diseases 218 (10), 1560-1570, 2018
Contributions to human breast milk microbiome and enteromammary transfer of Bifidobacterium breve
K Kordy, T Gaufin, M Mwangi, F Li, C Cerini, DJ Lee, H Adisetiyo, ...
PloS one 15 (1), e0219633, 2020
Evolution and Transmission of Carbapenem-Resistant Klebsiella pneumoniae Expressing the blaOXA-232 Gene During an Institutional Outbreak Associated With Endoscopic Retrograde …
S Yang, P Hemarajata, J Hindler, F Li, H Adisetiyo, G Aldrovandi, R Sebra, ...
Clinical Infectious Diseases 64 (7), 894-901, 2017
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