| Structure-altering mutations of the SARS-CoV-2 frameshifting RNA element T Schlick, Q Zhu, S Jain, S Yan Biophysical journal 120 (6), 1040-1053, 2021 | 49 | 2021 |
| To knot or not to knot: multiple conformations of the SARS-CoV-2 frameshifting RNA element T Schlick, Q Zhu, A Dey, S Jain, S Yan, A Laederach Journal of the American Chemical Society 143 (30), 11404-11422, 2021 | 46 | 2021 |
| Length-dependent motions of SARS-CoV-2 frameshifting RNA pseudoknot and alternative conformations suggest avenues for frameshifting suppression S Yan, Q Zhu, S Jain, T Schlick Nature communications 13 (1), 4284, 2022 | 22 | 2022 |
| Evolution of coronavirus frameshifting elements: Competing stem networks explain conservation and variability S Yan, Q Zhu, J Hohl, A Dong, T Schlick Proceedings of the National Academy of Sciences 120 (20), e2221324120, 2023 | 10 | 2023 |
| Sampling performance of multiple independent molecular dynamics simulations of an RNA aptamer S Yan, JM Peck, M Ilgu, M Nilsen-Hamilton, MH Lamm ACS omega 5 (32), 20187-20201, 2020 | 10 | 2020 |
| Common secondary and tertiary structural features of aptamer–ligand interaction shared by RNA aptamers with different primary sequences M Ilgu, S Yan, RM Khounlo, MH Lamm, M Nilsen-Hamilton Molecules 24 (24), 4535, 2019 | 10 | 2019 |
| Computational Modeling of RNA Aptamers: Structure Prediction of the Apo State S Yan, M Ilgu, M Nilsen-Hamilton, MH Lamm The Journal of Physical Chemistry B 126 (37), 7114-7125, 2022 | 2 | 2022 |
| Evolutionarily distinct and sperm-specific supersized chromatin loops are marked by Helitron transposons in Xenopus tropicalis Z Shi, J Xu, L Niu, W Shen, S Yan, Y Tan, X Quan, E Cheung, K Huang, ... Cell Reports 42 (3), 2023 | 1 | 2023 |
| Abolished frameshifting for predicted structure-stabilizing SARS-CoV-2 mutants: Implications to alternative conformations and their statistical structural analyses A Dey, A Laederach, S Yan, T Schlick bioRxiv, 2024.03. 28.586935, 2024 | | 2024 |
| Modeling and Simulating RNA: Combining Structural, Dynamic, and Evolutionary Perspectives for Coronavirus Applications T Schlick, S Yan Elsevier, 2023 | | 2023 |
| To knot and not: Multiple conformations of the SARS-CoV-2 frameshifting RNA element (preprint) T Schlick, Q Zhu, A Dey, S Jain, S Yan, A Laederach | | 2021 |
| Structure-Altering Mutations of the SARS-CoV-2 Frame Shifting RNA Element (preprint) T Schlick, Q Zhu, S Jain, S Yan, M Shrotri, D Leeman, S Rigby, ... | | 2020 |
| Approaches for studying RNA aptamers with molecular dynamics simulation S Yan Iowa State University, 2019 | | 2019 |
| Computational Modeling of RNA Aptamers: Structure Prediction of the Ligand-Free State S Yan, M Ilgu, M Nilsen-Hamilton, M Lamm 2018 AIChE Annual Meeting, 2018 | | 2018 |
| A Study of the Testing Effect in an Engineering Classroom MH Lamm, S Yan, CR Coffman, CL Manz, RD Reason 2018 ASEE Annual Conference & Exposition, 2018 | | 2018 |
