| On cherry-picking and network containment R Janssen, Y Murakami Theoretical Computer Science 856, 121-150, 2021 | 33* | 2021 |
| Orienting undirected phylogenetic networks KT Huber, L van Iersel, R Janssen, M Jones, V Moulton, Y Murakami, ... Journal of Computer and System Sciences 140, 103480, 2024 | 21* | 2024 |
| Distinguishing level-1 phylogenetic networks on the basis of data generated by Markov processes E Gross, L van Iersel, R Janssen, M Jones, C Long, Y Murakami Journal of Mathematical Biology 83 (3), 1-24, 2021 | 20 | 2021 |
| Polynomial-time algorithms for phylogenetic inference problems involving duplication and reticulation L Van Iersel, R Janssen, M Jones, Y Murakami, N Zeh IEEE/ACM transactions on computational biology and bioinformatics 17 (1), 14-26, 2019 | 18* | 2019 |
| Reconstructing Tree-Child Networks from Reticulate-Edge-Deleted Subnetworks Y Murakami, L van Iersel, R Janssen, M Jones, V Moulton arXiv preprint arXiv:1811.06777, 2018 | 18 | 2018 |
| A practical fixed-parameter algorithm for constructing tree-child networks from multiple binary trees L van Iersel, R Janssen, M Jones, Y Murakami, N Zeh Algorithmica 84 (4), 917-960, 2022 | 17 | 2022 |
| A unifying characterization of tree-based networks and orchard networks using cherry covers L van Iersel, R Janssen, M Jones, Y Murakami, N Zeh Advances in Applied Mathematics 129, 102222, 2021 | 15 | 2021 |
| Orchard networks are trees with additional horizontal arcs L van Iersel, R Janssen, M Jones, Y Murakami Bulletin of Mathematical Biology 84 (8), 76, 2022 | 11 | 2022 |
| Recognizing and realizing cactus metrics M Hayamizu, KT Huber, V Moulton, Y Murakami Information Processing Letters 157, 105916, 2020 | 10 | 2020 |
| Linear time algorithm for tree-child network containment R Janssen, Y Murakami International Conference on Algorithms for Computational Biology, 93-107, 2020 | 10 | 2020 |
| Reconstructibility of unrooted level-k phylogenetic networks from distances L van Iersel, V Moulton, Y Murakami Advances in Applied Mathematics 120, 102075, 2020 | 7 | 2020 |
| Combining networks using cherry picking sequences R Janssen, M Jones, Y Murakami International Conference on Algorithms for Computational Biology, 77-92, 2020 | 7 | 2020 |
| Polynomial invariants for cactuses L van Iersel, V Moulton, Y Murakami Information Processing Letters 182, 106394, 2023 | 3 | 2023 |
| On Phylogenetic Encodings and Orchard Networks Y Murakami Delft University of Technology, 2021 | 2 | 2021 |
| The Graph Burning Conjecture is true for trees without degree-2 vertices Y Murakami arXiv preprint arXiv:2312.13972, 2023 | 1 | 2023 |
| Orienting undirected phylogenetic networks to tree-child network S Maeda, Y Kaneko, H Muramatsu, Y Murakami, M Hayamizu arXiv preprint arXiv:2305.10162, 2023 | 1 | 2023 |
| Level-2 networks from shortest and longest distances KT Huber, L van Iersel, R Janssen, M Jones, V Moulton, Y Murakami Discrete Applied Mathematics 306, 138-165, 2022 | 1 | 2022 |
| A near-linear kernel for bounded-state parsimony distance E Deen, L van Iersel, R Janssen, M Jones, Y Murakami, N Zeh Journal of Computer and System Sciences 140, 103477, 2024 | | 2024 |
| Making a Network Orchard by Adding Leaves L van Iersel, M Jones, E Julien, Y Murakami arXiv preprint arXiv:2305.03106, 2023 | | 2023 |
Remie JanssenDevOps engineer, RIVMVerified email at rivm.nl
