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Christophe Klopp
Christophe Klopp
Research engineer
Verified email at inrae.fr
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Cited by
Year
The tomato genome sequence provides insights into fleshy fruit evolution
xx Tomato Genome Consortium
Nature 485 (7400), 635, 2012
32642012
jvenn: an interactive Venn diagram viewer
P Bardou, J Mariette, F Escudié, C Djemiel, C Klopp
BMC bioinformatics 15, 1-7, 2014
17392014
The rainbow trout genome provides novel insights into evolution after whole-genome duplication in vertebrates
C Berthelot, F Brunet, D Chalopin, A Juanchich, M Bernard, B Noël, ...
Nature communications 5 (1), 1-10, 2014
9452014
Whole-genome sequencing of 234 bulls facilitates mapping of monogenic and complex traits in cattle
HD Daetwyler, A Capitan, H Pausch, P Stothard, R Van Binsbergen, ...
Nature genetics 46 (8), 858-865, 2014
8522014
The BioMart community portal: an innovative alternative to large, centralized data repositories
D Smedley, S Haider, S Durinck, L Pandini, P Provero, J Allen, O Arnaiz, ...
Nucleic acids research 43 (W1), W589-W598, 2015
8102015
Metabolic adaptation to a high-fat diet is associated with a change in the gut microbiota
M Serino, E Luche, S Gres, A Baylac, M Bergé, C Cenac, A Waget, ...
Gut 61 (4), 543-553, 2012
7182012
An immune-related gene evolved into the master sex-determining gene in rainbow trout, Oncorhynchus mykiss
A Yano, R Guyomard, B Nicol, E Jouanno, E Quillet, C Klopp, C Cabau, ...
Current Biology 22 (15), 1423-1428, 2012
5482012
D-GENIES: dot plot large genomes in an interactive, efficient and simple way
F Cabanettes, C Klopp
PeerJ 6, e4958, 2018
4892018
Involvement of tissue bacteria in the onset of diabetes in humans: evidence for a concept
J Amar, M Serino, C Lange, C Chabo, J Iacovoni, S Mondot, P Lepage, ...
Diabetologia 54, 3055-3061, 2011
3902011
Oak genome reveals facets of long lifespan
C Plomion, JM Aury, J Amselem, T Leroy, F Murat, S Duplessis, S Faye, ...
Nature plants 4 (7), 440-452, 2018
3512018
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database
J Pasquier, C Cabau, T Nguyen, E Jouanno, D Severac, I Braasch, ...
BMC genomics 17, 1-10, 2016
3182016
Functional metagenomics to mine the human gut microbiome for dietary fiber catabolic enzymes
L Tasse, J Bercovici, S Pizzut-Serin, P Robe, J Tap, C Klopp, BL Cantarel, ...
Genome research 20 (11), 1605-1612, 2010
2802010
Design and characterization of a 52K SNP chip for goats
G Tosser-Klopp, P Bardou, O Bouchez, C Cabau, R Crooijmans, Y Dong, ...
PloS one 9 (1), e86227, 2014
2652014
Microbial ecology of the rumen evaluated by 454 GS FLX pyrosequencing is affected by starch and oil supplementation of diets
Z Asma, C Sylvie, C Laurent, M Jérôme, K Christophe, B Olivier, ...
FEMS microbiology ecology 83 (2), 504-514, 2013
2562013
Detection of haplotypes associated with prenatal death in dairy cattle and identification of deleterious mutations in GART, SHBG and SLC37A2
S Fritz, A Capitan, A Djari, SC Rodriguez, A Barbat, A Baur, C Grohs, ...
PloS one 8 (6), e65550, 2013
2422013
Reconstructing the genome of the most recent common ancestor of flowering plants
F Murat, A Armero, C Pont, C Klopp, J Salse
Nature genetics 49 (4), 490-496, 2017
2222017
The sterlet sturgeon genome sequence and the mechanisms of segmental rediploidization
K Du, M Stöck, S Kneitz, C Klopp, JM Woltering, MC Adolfi, R Feron, ...
Nature ecology & evolution 4 (6), 841-852, 2020
1952020
Generation and analysis of a 29,745 unique Expressed Sequence Tags from the Pacific oyster (Crassostrea gigas) assembled into a publicly accessible database …
E Fleury, A Huvet, C Lelong, J De Lorgeril, V Boulo, Y Gueguen, ...
BMC genomics 10, 1-15, 2009
1512009
Ten steps to get started in Genome Assembly and Annotation
VD Del Angel, E Hjerde, L Sterck, S Capella-Gutierrez, C Notredame, ...
F1000Research 7, 2018
1502018
Decoding the oak genome: public release of sequence data, assembly, annotation and publication strategies
C Plomion, JM Aury, J Amselem, T Alaeitabar, V Barbe, C Belser, ...
Molecular ecology resources 16 (1), 254-265, 2016
1452016
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