| Evolution of genes and genomes on the Drosophila phylogeny AG Clark, MB Eisen, DR Smith, CM Bergman, B Oliver, TA Markow, ... Nature 450 (7167), 203-218, 2007 | 1981* | 2007 |
| Homotypic clusters of transcription factor binding sites are a key component of human promoters and enhancers V Gotea, A Visel, JM Westlund, MA Nobrega, LA Pennacchio, ... Genome research 20 (5), 565-577, 2010 | 215 | 2010 |
| Whole-genome sequencing identifies a recurrent functional synonymous mutation in melanoma JJ Gartner, SCJ Parker, TD Prickett, K Dutton-Regester, ML Stitzel, JC Lin, ... Proceedings of the National Academy of Sciences 110 (33), 13481-13486, 2013 | 152 | 2013 |
| Transposable elements as a significant source of transcription regulating signals BG Thornburg, V Gotea, W Makałowski Gene 365, 104-110, 2006 | 148 | 2006 |
| DiRE: identifying distant regulatory elements of co-expressed genes V Gotea, I Ovcharenko Nucleic acids research 36 (suppl_2), W133-W139, 2008 | 130 | 2008 |
| Do transposable elements really contribute to proteomes? V Gotea, W Makałowski TRENDS in Genetics 22 (5), 260-267, 2006 | 100 | 2006 |
| Recurrent patterns of DNA methylation in the ZNF154, CASP8, and VHL promoters across a wide spectrum of human solid epithelial tumors and cancer cell lines F Sánchez-Vega, V Gotea, HM Petrykowska, G Margolin, TC Krivak, ... Epigenetics 8 (12), 1355-1372, 2013 | 49 | 2013 |
| Spliceosomal small nuclear RNA genes in 11 insect genomes SM Mount, V Gotea, CF Lin, K Hernandez, W Makałowski Rna 13 (1), 5-14, 2007 | 43 | 2007 |
| The functional relevance of somatic synonymous mutations in melanoma and other cancers V Gotea, JJ Gartner, N Qutob, L Elnitski, Y Samuels Pigment cell & melanoma research 28 (6), 673-684, 2015 | 42 | 2015 |
| Tissue-specific and ubiquitous expression patterns from alternative promoters of human genes E Jacox, V Gotea, I Ovcharenko, L Elnitski PLoS One 5 (8), e12274, 2010 | 37 | 2010 |
| Pan-cancer stratification of solid human epithelial tumors and cancer cell lines reveals commonalities and tissue-specific features of the CpG island methylator phenotype F Sánchez-Vega, V Gotea, G Margolin, L Elnitski Epigenetics & chromatin 8 (1), 14, 2015 | 32 | 2015 |
| Transposable elements and their identification W Makałowski, A Pande, V Gotea, I Makałowska Evolutionary Genomics: Statistical and Computational Methods, Volume 1, 337-359, 2012 | 29 | 2012 |
| Mastering seeds for genomic size nucleotide BLAST searches V Gotea, V Veeramachaneni, W Makałowski Nucleic acids research 31 (23), 6935-6941, 2003 | 27 | 2003 |
| Bidirectional promoters as important drivers for the emergence of species-specific transcripts V Gotea, HM Petrykowska, L Elnitski PloS one 8 (2), e57323, 2013 | 25 | 2013 |
| Genome-wide detection of a TFIID localization element from an initial human disease mutation MQ Yang, K Laflamme, V Gotea, CH Joiner, NE Seidel, C Wong, ... Nucleic acids research 39 (6), 2175-2187, 2010 | 25 | 2010 |
| Functional analysis of synonymous substitutions predicted to affect splicing of the CFTR gene A Scott, HM Petrykowska, T Hefferon, V Gotea, L Elnitski Journal of Cystic Fibrosis 11 (6), 511-517, 2012 | 22 | 2012 |
| Significant associations between driver gene mutations and DNA methylation alterations across many cancer types YC Chen, V Gotea, G Margolin, L Elnitski PLoS computational biology 13 (11), e1005840, 2017 | 20 | 2017 |
| The European mink (Mustela lutreola) in the Danube delta V Gotea, A Kranz Small Carnivore Conservation 21, 23-25, 1999 | 19 | 1999 |
| Transposable Elements: Classification, Identification, and Their Use As a Tool For Comparative Genomics W Makałowski, V Gotea, A Pande, I Makałowska Evolutionary Genomics, 177-207, 2019 | 17 | 2019 |
| A case of IL-7R deficiency caused by a novel synonymous mutation and implications for mutation screening in SCID diagnosis. F Gallego-Bustos, V Gotea, JT Ramos-Amador, R Rodríguez-Pena, J GIL, ... Frontiers in Immunology 7, 443, 2016 | 11 | 2016 |
