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David Penkler
David Penkler
Computational Biology, Roche Diagnostics
Verified email at roche.com
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Cited by
Year
MD-TASK: a software suite for analyzing molecular dynamics trajectories
DK Brown, DL Penkler, O Sheik Amamuddy, C Ross, AR Atilgan, ...
Bioinformatics 33 (17), 2768-2771, 2017
1472017
SANCDB: a South African natural compound database
R Hatherley, DK Brown, TM Musyoka, DL Penkler, N Faya, KA Lobb, ...
Journal of cheminformatics 7, 1-9, 2015
1102015
Allosteric modulation of human Hsp90α conformational dynamics
DL Penkler, C Atilgan, O Tastan Bishop
Journal of Chemical Information and Modeling 58 (2), 383-404, 2018
712018
Perturbation–response scanning reveals key residues for allosteric control in Hsp70
D Penkler, O Sensoy, C Atilgan, O Tastan Bishop
Journal of Chemical Information and Modeling 57 (6), 1359-1374, 2017
642017
Human, vector and parasite Hsp90 proteins: A comparative bioinformatics analysis
N Faya, DL Penkler, ÖT Bishop
FEBS Open Bio 5, 916-927, 2015
352015
Modulation of human Hsp90α conformational dynamics by allosteric ligand interaction at the C-terminal domain
DL Penkler, Ö Tastan Bishop
Scientific Reports 9 (1), 1600, 2019
292019
JMS: an open source workflow management system and web-based cluster front-end for high performance computing
DK Brown, DL Penkler, TM Musyoka, ÖT Bishop
PLoS One 10 (8), e0134273, 2015
282015
Binding and entry of a non-enveloped T= 4 insect RNA virus is triggered by alkaline pH
DL Penkler, M Jiwaji, T Domitrovic, JR Short, JE Johnson, RA Dorrington
Virology 498, 277-287, 2016
92016
SANCDB: a South African natural compound database. J Cheminform 7: 29
R Hatherley, DK Brown, TM Musyoka, DL Penkler, N Faya, KA Lobb, ...
62015
a South African natural compound database. J
R Hatherley, DK Brown, TM Musyoka, DL Penkler, N Faya, KA Lobb, ...
Cheminformatics 7, 2015
52015
In silico analysis of human Hsp90 for the identification of novel anti-cancer drug target sites and natural compound inhibitors
DL Penkler
Rhodes University, 2015
12015
A Dynamics Based Analysis of Allosteric Modulation in Heat Shock Proteins
DL Penkler
Rhodes University, South Africa, 2018
2018
Targeting allosteric sites of human heat shock proteins for inhibitor design against cancer
D Penkler, A Amusengeri, OT Bishop
FEBS OPEN BIO 8, 13-13, 2018
2018
Allosteric Modulation of Conformational Dynamics in Human Hsp90α: A Computational Study
DL Penkler, C Atilgan, ÖT Bishop
bioRxiv, 198341, 2017
2017
APPLICATIONS NOTES Genome analysis Assembling draft genomes using contiBAIT K. O’Neill, M. Hills, M. Gottlieb, M. Borkowski, A. Karsan and PM Lansdorp …
DK Brown, DL Penkler, OS Amamuddy, C Ross, AR Atilgan, C Atilgan
BIOINFORMATICS 33 (17), 2017
2017
SANCDB: a South African natural compound database
TM Musyoka, DK Brown, N Faya, DL Penkler, KA Lobb, R Hatherley, ...
ChemistryCentral, 2015
2015
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