Software news and updates carma: A molecular dynamics analysis program NM Glykos Journal of computational chemistry 27 (14), 1765-1768, 2006 | 500 | 2006 |
Grcarma: A fully automated task‐oriented interface for the analysis of molecular dynamics trajectories PI Koukos, NM Glykos Journal of computational chemistry 34 (26), 2310-2312, 2013 | 124 | 2013 |
Protein flexibility and enzymatic catalysis M Kokkinidis, NM Glykos, VE Fadouloglou Advances in protein chemistry and structural biology 87, 181-218, 2012 | 121 | 2012 |
Determination of protein oligomerization state: two approaches based on glutaraldehyde crosslinking VE Fadouloglou, M Kokkinidis, NM Glykos Analytical biochemistry 373 (2), 404-406, 2008 | 82 | 2008 |
Structure of HrcQB-C, a conserved component of the bacterial type III secretion systems VE Fadouloglou, AP Tampakaki, NM Glykos, MN Bastaki, JM Hadden, ... Proceedings of the National Academy of Sciences 101 (1), 70-75, 2004 | 75 | 2004 |
Protein plasticity to the extreme: changing the topology of a 4-α-helical bundle with a single amino acid substitution NM Glykos, G Cesareni, M Kokkinidis Structure 7 (6), 597-603, 1999 | 73 | 1999 |
A stochastic approach to molecular replacement NM Glykos, M Kokkinidis Acta Crystallographica Section D: Biological Crystallography 56 (2), 169-174, 2000 | 70 | 2000 |
Reconstruction of DNA sequences using genetic algorithms and cellular automata: Towards mutation prediction? C Mizas, GC Sirakoulis, V Mardiris, I Karafyllidis, N Glykos, ... Biosystems 92 (1), 61-68, 2008 | 62 | 2008 |
Three force fields' views of the 310 helix KK Patapati, NM Glykos Biophysical Journal 101 (7), 1766-1771, 2011 | 60 | 2011 |
The structure of AhrC, the arginine repressor/activator protein from Bacillus subtilis CA Dennis, NM Glykos, MR Parsons, SEV Phillips Acta Crystallographica Section D: Biological Crystallography 58 (3), 421-430, 2002 | 55 | 2002 |
Crystal structure of the BcZBP, a zinc‐binding protein from Bacillus cereus Functional insights from structural data VE Fadouloglou, A Deli, NM Glykos, E Psylinakis, V Bouriotis, ... The FEBS Journal 274 (12), 3044-3054, 2007 | 33 | 2007 |
Multidimensional molecular replacement NM Glykos, M Kokkinidis Acta Crystallographica Section D: Biological Crystallography 57 (10), 1462-1473, 2001 | 32 | 2001 |
On the application of Good-Turing statistics to quantify convergence of biomolecular simulations PI Koukos, NM Glykos Journal of chemical information and modeling 54 (1), 209-217, 2014 | 31 | 2014 |
Molecular simulation of peptides coming of age: Accurate prediction of folding, dynamics and structures PS Georgoulia, NM Glykos Archives of biochemistry and biophysics 664, 76-88, 2019 | 30 | 2019 |
Using J-Coupling Constants for Force Field Validation: Application to Hepta-alanine PS Georgoulia, NM Glykos The Journal of Physical Chemistry B 115 (51), 15221-15227, 2011 | 28 | 2011 |
Folding molecular dynamics simulations accurately predict the effect of mutations on the stability and structure of a vammin-derived peptide PI Koukos, NM Glykos The Journal of Physical Chemistry B 118 (34), 10076-10084, 2014 | 27 | 2014 |
Unusual α-carbon hydroxylation of proline promotes active-site maturation VE Fadouloglou, S Balomenou, M Aivaliotis, D Kotsifaki, S Arnaouteli, ... Journal of the American Chemical Society 139 (15), 5330-5337, 2017 | 25 | 2017 |
On the distribution of the bulk-solvent correction parameters NM Glykos, M Kokkinidis Acta Crystallographica Section D: Biological Crystallography 56 (8), 1070-1072, 2000 | 25 | 2000 |
Sensitivity of folding molecular dynamics simulations to even minor force field changes AP Serafeim, G Salamanos, KK Patapati, NM Glykos Journal of Chemical Information and Modeling 56 (10), 2035-2041, 2016 | 24 | 2016 |
Loopless Rop: Structure and dynamics of an engineered homotetrameric variant of the repressor of primer protein NM Glykos, Y Papanikolau, M Vlassi, D Kotsifaki, G Cesareni, ... Biochemistry 45 (36), 10905-10919, 2006 | 24 | 2006 |