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Simon G. Coetzee
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Comprehensive, integrative genomic analysis of diffuse lower-grade gliomas
Cancer Genome Atlas Research Network
New England Journal of Medicine 372 (26), 2481-2498, 2015
29492015
Molecular profiling reveals biologically discrete subsets and pathways of progression in diffuse glioma
M Ceccarelli, FP Barthel, TM Malta, TS Sabedot, SR Salama, BA Murray, ...
Cell 164 (3), 550-563, 2016
20242016
Identification of 12 new susceptibility loci for different histotypes of epithelial ovarian cancer
CM Phelan, KB Kuchenbaecker, JP Tyrer, SP Kar, K Lawrenson, ...
Nature genetics 49 (5), 680-691, 2017
4232017
Granulocyte-monocyte progenitors and monocyte-dendritic cell progenitors independently produce functionally distinct monocytes
A Yáñez, SG Coetzee, A Olsson, DE Muench, BP Berman, DJ Hazelett, ...
Immunity 47 (5), 890-902. e4, 2017
3902017
Identification of genetic susceptibility loci for colorectal tumors in a genome-wide meta-analysis
U Peters, S Jiao, FR Schumacher, CM Hutter, AK Aragaki, JA Baron, ...
Gastroenterology 144 (4), 799-807. e24, 2013
3672013
Identification of six new susceptibility loci for invasive epithelial ovarian cancer
KB Kuchenbaecker, SJ Ramus, J Tyrer, A Lee, HC Shen, J Beesley, ...
Nature genetics 47 (2), 164-171, 2015
3112015
motifbreakR: an R/Bioconductor package for predicting variant effects at transcription factor binding sites
SG Coetzee, GA Coetzee, DJ Hazelett
Bioinformatics 31 (23), 3847-3849, 2015
2552015
Genome-wide association analyses in East Asians identify new susceptibility loci for colorectal cancer
WH Jia, B Zhang, K Matsuo, A Shin, YB Xiang, SH Jee, DH Kim, Z Ren, ...
Nature genetics 45 (2), 191-196, 2013
2322013
Comprehensive functional annotation of 77 prostate cancer risk loci
DJ Hazelett, SK Rhie, M Gaddis, C Yan, DL Lakeland, SG Coetzee, ...
PLoS genetics 10 (1), e1004102, 2014
1882014
ONECUT2 is a targetable master regulator of lethal prostate cancer that suppresses the androgen axis
M Rotinen, S You, J Yang, SG Coetzee, M Reis-Sobreiro, WC Huang, ...
Nature medicine 24 (12), 1887-1898, 2018
1502018
FunciSNP: an R/bioconductor tool integrating functional non-coding data sets with genetic association studies to identify candidate regulatory SNPs
SG Coetzee, SK Rhie, BP Berman, GA Coetzee, H Noushmehr
Nucleic acids research 40 (18), e139-e139, 2012
1212012
ELMER v. 2: an R/Bioconductor package to reconstruct gene regulatory networks from DNA methylation and transcriptome profiles
TC Silva, SG Coetzee, N Gull, L Yao, DJ Hazelett, H Noushmehr, DC Lin, ...
Bioinformatics 35 (11), 1974-1977, 2019
1012019
Interleukin-6-related genotypes, body mass index, and risk of multiple myeloma and plasmacytoma
W Cozen, M Gebregziabher, DV Conti, DJ Van Den Berg, GA Coetzee, ...
Cancer Epidemiology Biomarkers & Prevention 15 (11), 2285-2291, 2006
782006
Enrichment of risk SNPs in regulatory regions implicate diverse tissues in Parkinson’s disease etiology
SG Coetzee, S Pierce, P Brundin, L Brundin, DJ Hazelett, GA Coetzee
Scientific reports 6 (1), 30509, 2016
582016
Comprehensive functional annotation of seventy-one breast cancer risk Loci
SK Rhie, SG Coetzee, H Noushmehr, C Yan, JM Kim, CA Haiman, ...
PloS one 8 (5), e63925, 2013
572013
Opposing Effects of Runx2 and Estradiol on Breast Cancer Cell Proliferation: In Vitro Identification of Reciprocally Regulated Gene Signature Related to Clinical …
NO Chimge, SK Baniwal, J Luo, S Coetzee, O Khalid, BP Berman, ...
Clinical Cancer Research 18 (3), 901-911, 2012
572012
GENAVi: a shiny web application for gene expression normalization, analysis and visualization
ALP Reyes, TC Silva, SG Coetzee, JT Plummer, BD Davis, S Chen, ...
BMC genomics 20, 1-9, 2019
522019
A study of high-grade serous ovarian cancer origins implicates the SOX18 transcription factor in tumor development
K Lawrenson, MAS Fonseca, AY Liu, FS Dezem, JM Lee, X Lin, ...
Cell reports 29 (11), 3726-3735. e4, 2019
512019
Nucleosome positioning and histone modifications define relationships between regulatory elements and nearby gene expression in breast epithelial cells
SK Rhie, DJ Hazelett, SG Coetzee, C Yan, H Noushmehr, GA Coetzee
BMC genomics 15, 1-19, 2014
502014
Cell-type-specific enrichment of risk-associated regulatory elements at ovarian cancer susceptibility loci
SG Coetzee, HC Shen, DJ Hazelett, K Lawrenson, K Kuchenbaecker, ...
Human molecular genetics 24 (13), 3595-3607, 2015
482015
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