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M. Volkan Atalay
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Recent applications of deep learning and machine intelligence on in silico drug discovery: methods, tools and databases
AS Rifaioglu, H Atas, MJ Martin, R Cetin-Atalay, V Atalay, T Doğan
Briefings in bioinformatics 20 (5), 1878-1912, 2019
4122019
The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens
N Zhou, Y Jiang, TR Bergquist, AJ Lee, BZ Kacsoh, AW Crocker, ...
Genome biology 20, 1-23, 2019
3512019
DEEPScreen: high performance drug–target interaction prediction with convolutional neural networks using 2-D structural compound representations
AS Rifaioglu, E Nalbat, V Atalay, MJ Martin, R Cetin-Atalay, T Doğan
Chemical science 11 (9), 2531-2557, 2020
1662020
Silhouette-based 3-D model reconstruction from multiple images
AY Mulayim, U Yilmaz, V Atalay
IEEE Transactions on Systems, Man, and Cybernetics, Part B (Cybernetics) 33 …, 2003
1532003
ECPred: a tool for the prediction of the enzymatic functions of protein sequences based on the EC nomenclature
A Dalkiran, AS Rifaioglu, MJ Martin, R Cetin-Atalay, V Atalay, T Doğan
BMC bioinformatics 19, 1-13, 2018
1432018
Feature extraction and classification of blood cells for an automated differential blood count system
G Ongun, U Halici, K Leblebicioglu, V Atalay, M Beksaç, S Beksaç
IJCNN'01. International Joint Conference on Neural Networks. Proceedings …, 2001
1332001
DEEPred: automated protein function prediction with multi-task feed-forward deep neural networks
A Sureyya Rifaioglu, T Doğan, M Jesus Martin, R Cetin-Atalay, V Atalay
Scientific reports 9 (1), 7344, 2019
1312019
Projection based method for segmentation of human face and its evaluation
S Baskan, MM Bulut, V Atalay
Pattern Recognition Letters 23 (14), 1623-1629, 2002
1172002
Data stream clustering: a review
A Zubaroğlu, V Atalay
Artificial Intelligence Review 54 (2), 1201-1236, 2021
1152021
An automated differential blood count system
G Ongun, U Halici, K Leblebicioglu, V Atalay, M Beksac, S Beksac
2001 Conference Proceedings of the 23rd Annual International Conference of …, 2001
1152001
The random neural network model for texture generation
V Atalay, E Gelenbe, N Yalabik
International Journal of Pattern Recognition and Artificial Intelligence 6 …, 1992
1151992
Parallel algorithm for colour texture generation using the random neural network model
V Atalay, E Gelenbe
International Journal of Pattern Recognition and Artificial Intelligence 6 …, 1992
1101992
PCA for gender estimation: Which eigenvectors contribute?
K Balci, V Atalay
2002 International Conference on Pattern Recognition 3, 363-366, 2002
882002
MDeePred: novel multi-channel protein featurization for deep learning-based binding affinity prediction in drug discovery
AS Rifaioglu, R Cetin Atalay, D Cansen Kahraman, T Doğan, M Martin, ...
Bioinformatics 37 (5), 693-704, 2021
802021
A hierarchical representation of form documents for identification and retrieval
P Duygulu, V Atalay
International Journal on Document Analysis and Recognition 5, 17-27, 2002
652002
Crowdsourced mapping of unexplored target space of kinase inhibitors
Nature Communications 12 (1), 1-18, 2021
62*2021
Repulsive attractive network for baseline extraction on document images
E Öztop, AY Mülayim, V Atalay, F Yarman-Vural
Signal Processing 75 (1), 1-10, 1999
581999
Computer vision based mouse
A Erdem, E Erdem, Y Yardimci, V Atalay, AE Cetin
2002 IEEE International Conference on Acoustics, Speech, and Signal …, 2002
462002
Vision-based single-stroke character recognition for wearable computing
OF Ozer, O Ozun, CO Tuzel, V Atalay, AE Cetin
IEEE Intelligent Systems 16 (3), 33-37, 2001
392001
Implicit motif distribution based hybrid computational kernel for sequence classification
V Atalay, R Cetin-Atalay
Bioinformatics 21 (8), 1429-1436, 2005
382005
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