Ahmet Sureyya Rifaioglu
Ahmet Sureyya Rifaioglu
Computer Engineering, Middle East Technical University
ceng.metu.edu.tr üzerinde doğrulanmış e-posta adresine sahip
Başlık
Alıntı yapanlar
Alıntı yapanlar
Yıl
Recent applications of deep learning and machine intelligence on in silico drug discovery: methods, tools and databases
AS Rifaioglu, H Atas, MJ Martin, R Cetin-Atalay, V Atalay, T Doğan
Briefings in bioinformatics 20 (5), 1878-1912, 2019
682019
The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens
N Zhou, Y Jiang, TR Bergquist, AJ Lee, BZ Kacsoh, AW Crocker, ...
Genome biology 20 (1), 1-23, 2019
432019
ECPred: a tool for the prediction of the enzymatic functions of protein sequences based on the EC nomenclature
A Dalkiran, AS Rifaioglu, MJ Martin, R Cetin-Atalay, V Atalay, T Doğan
BMC bioinformatics 19 (1), 1-13, 2018
192018
DEEPred: automated protein function prediction with multi-task feed-forward deep neural networks
AS Rifaioglu, T Doğan, MJ Martin, R Cetin-Atalay, V Atalay
Scientific reports 9 (1), 1-16, 2019
17*2019
DEEPScreen: high performance drug–target interaction prediction with convolutional neural networks using 2-D structural compound representations
AS Rifaioglu, E Nalbat, V Atalay, MJ Martin, R Cetin-Atalay, T Doğan
Chemical Science 11 (9), 2531-2557, 2020
132020
Large‐scale automated function prediction of protein sequences and an experimental case study validation on PTEN transcript variants
AS Rifaioglu, T Doğan, ÖS Saraç, T Ersahin, R Saidi, MV Atalay, ...
Proteins: Structure, Function, and Bioinformatics 86 (2), 135-151, 2018
52018
Heval Atas, Maria Jesus Martin, Rengul Cetin-Atalay, Volkan Atalay, and Tunca Doğan. Recent applications of deep learning and machine intelligence on in silico drug discovery …
AS Rifaioglu
Briefings in bioinformatics, 2018
52018
iBioProVis: Interactive Visualization and Analysis of Compound Bioactivity Space
A Donmez, AS Rifaioglu, A Acar, T Dogana, R Cetin-Atalay, V Atalay
Bioinformatics, 2020
12020
In vitro validation of drug-target interactions revealed in silico by Comprehensive Resource of Biomedical Relations with Network Representations and Deep Learning (CROssBAR …
E Nalbat, AS Rifaioglu, T Dogan, MJ Martin, R Cetin-Atalay, V Atalay
Cancer Research 80 (16 Supplement), 5235-5235, 2020
2020
CROssBAR: Comprehensive Resource of Biomedical Relations with Deep Learning Applications and Knowledge Graph Representations
T Dogan, H Atas, V Joshi, A Atakan, AS Rifaioglu, E Nalbat, A Nightingale, ...
bioRxiv, 2020
2020
Unsupervised identification of redundant domain entries in InterPro database using clustering techniques
AS Rifaioğlu, T Doğan, T Can
Proceedings of the 6th ACM Conference on Bioinformatics, Computational …, 2015
2015
CROssBAR: Comprehensive Resource of Biomedical Relations with Network Representations and Deep Learning”, Oral presentation
M Atalay, T Doğan, R Atalay, E Nalbat, A Rifaioğlu, H Ataş, M Martin
iBioProVis: Interactive Visualization and Analysis of Compound Bioactivity Space
M Atalay, A Rifaioğlu, A Acar, R Atalay, T Doğan, M Martin, A Dönmez
Sistem, işlemi şu anda gerçekleştiremiyor. Daha sonra yeniden deneyin.
Makaleler 1–13