| Assemblathon 1: a competitive assessment of de novo short read assembly methods D Earl, K Bradnam, JS John, A Darling, D Lin, J Fass, HOK Yu, V Buffalo, ... Genome research 21 (12), 2224-2241, 2011 | 633 | 2011 |
| Construction of the third-generation Zea mays haplotype map R Bukowski, X Guo, Y Lu, C Zou, B He, Z Rong, B Wang, D Xu, B Yang, ... Gigascience 7 (4), gix134, 2018 | 282 | 2018 |
| Transcriptome profiling of citrus fruit response to huanglongbing disease F Martinelli, SL Uratsu, U Albrecht, RL Reagan, ML Phu, M Britton, ... PloS one 7 (5), e38039, 2012 | 204 | 2012 |
| Separating homeologs by phasing in the tetraploid wheat transcriptome KV Krasileva, V Buffalo, P Bailey, S Pearce, S Ayling, F Tabbita, M Soria, ... Genome Biology 14, 1-19, 2013 | 177* | 2013 |
| Regulation of Zn and Fe transporters by the GPC1gene during early wheat monocarpic senescence S Pearce, F Tabbita, D Cantu, V Buffalo, R Avni, H Vazquez-Gross, ... BMC Plant Biology 14, 1-23, 2014 | 120 | 2014 |
| Estimating the genome-wide contribution of selection to temporal allele frequency change V Buffalo, G Coop Proceedings of the National Academy of Sciences 117 (34), 20672-20680, 2020 | 81 | 2020 |
| Quantifying the relationship between genetic diversity and population size suggests natural selection cannot explain Lewontin’s Paradox V Buffalo Elife 10, e67509, 2021 | 78 | 2021 |
| The linked selection signature of rapid adaptation in temporal genomic data V Buffalo, G Coop Genetics 213 (3), 1007-1045, 2019 | 55 | 2019 |
| Scythe-a Bayesian adapter trimmer V Buffalo Website: http://github. com/vsbuffalo/scythe, 2011 | 48* | 2011 |
| Bioinformatics Data Skills: Reproducible and Robust Research with Open Source Tools V Buffalo O'Reilly Media Inc, 2015 | 27 | 2015 |
| Experimental evolution reveals the synergistic genomic mechanisms of adaptation to ocean warming and acidification in a marine copepod RS Brennan, JA DeMayo, HG Dam, M Finiguerra, H Baumann, V Buffalo, ... Proceedings of the National Academy of Sciences 119 (38), e2201521119, 2022 | 21 | 2022 |
| Identifying human-rhesus macaque gene orthologs using heterospecific SNP probes S Kanthaswamy, J Ng, CT Ross, JS Trask, DG Smith, VS Buffalo, JN Fass, ... Genomics 101 (1), 30-37, 2013 | 14 | 2013 |
| A genealogical look at shared ancestry on the X chromosome V Buffalo, SM Mount, G Coop Genetics 204 (1), 57-75, 2016 | 12 | 2016 |
| QRQC-quick read quality control V Buffalo Reference Source, 2012 | 7 | 2012 |
| Multiple clonal MLL fusions in a patient receiving CHOP‐based chemotherapy SJ Shih, J Fass, V Buffalo, D Lin, SP Singh, MO Diaz, AT Vaughan British journal of haematology 159 (1), 50-57, 2012 | 3 | 2012 |
| A quantitative genetic model of background selection in humans V Buffalo, AD Kern Plos Genetics 20 (3), e1011144, 2024 | 2 | 2024 |
| Using the qrqc package to gather information about sequence qualities V Buffalo Reading in a sequence file plotting quality of fastq summary objects, 1-15, 2012 | 1 | 2012 |
| SciDataFlow: a tool for improving the flow of data through science V Buffalo Bioinformatics 40 (1), btad754, 2024 | | 2024 |
| Exploring the Effects of Linkage for Ancestry and Temporal Polygenic Adaptation VS Buffalo University of California, Davis, 2019 | | 2019 |
| Clonal MLL Fusions with a Signature of Activation Induced Cytidine Deaminase Activity BT Ho, SJ Shih, SP Singh, MO Diaz, D Lin, V Buffalo, J Fass, AT Vaughan Blood 118 (21), 3444, 2011 | | 2011 |
