Emre Guney
Emre Guney
Senior Research Fellow, GRIB, UPF-IMIM
Verified email at upf.edu - Homepage
Title
Cited by
Cited by
Year
Network-based in silico drug efficacy screening
E Guney, J Menche, M Vidal, AL Barábasi
Nature communications 7 (1), 1-13, 2016
2722016
Transcription factor NRF2 as a therapeutic target for chronic diseases: a systems medicine approach
A Cuadrado, G Manda, A Hassan, MJ Alcaraz, C Barbas, A Daiber, ...
Pharmacological reviews 70 (2), 348-383, 2018
2602018
HotSprint: database of computational hot spots in protein interfaces
E Guney, N Tuncbag, O Keskin, A Gursoy
Nucleic acids research 36 (suppl_1), D662-D666, 2007
1332007
Community assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen
MP Menden, D Wang, MJ Mason, B Szalai, KC Bulusu, Y Guan, T Yu, ...
Nature communications 10 (1), 1-17, 2019
1252019
Architectures and functional coverage of protein–protein interfaces
N Tuncbag, A Gursoy, E Guney, R Nussinov, O Keskin
Journal of molecular biology 381 (3), 785-802, 2008
1202008
Exploiting protein-protein interaction networks for genome-wide disease-gene prioritization
E Guney, B Oliva
Public Library of Science 7 (9), e43557, 2012
992012
Biana: a software framework for compiling biological interactions and analyzing networks
J Garcia-Garcia, E Guney, R Aragues, J Planas-Iglesias, B Oliva
BMC bioinformatics 11 (1), 1-12, 2010
832010
Crowdsourced assessment of common genetic contribution to predicting anti-TNF treatment response in rheumatoid arthritis
SK Sieberts, F Zhu, J García-García, E Stahl, A Pratap, G Pandey, ...
Nature communications 7 (1), 1-10, 2016
792016
Tissue specificity of human disease module
M Kitsak, A Sharma, J Menche, E Guney, SD Ghiassian, J Loscalzo, ...
Scientific reports 6 (1), 1-12, 2016
722016
From single drug targets to synergistic network pharmacology in ischemic stroke
AI Casas, AA Hassan, SJ Larsen, V Gomez-Rangel, M Elbatreek, ...
Proceedings of the National Academy of Sciences 116 (14), 7129-7136, 2019
462019
Sex and gender differences and biases in artificial intelligence for biomedicine and healthcare
D Cirillo, S Catuara-Solarz, C Morey, E Guney, L Subirats, S Mellino, ...
NPJ digital medicine 3 (1), 1-11, 2020
412020
Integrating personalized gene expression profiles into predictive disease-associated gene pools
J Menche, E Guney, A Sharma, PJ Branigan, MJ Loza, F Baribaud, ...
NPJ systems biology and applications 3 (1), 1-10, 2017
412017
Integrating structure to protein-protein interaction networks that drive metastasis to brain and lung in breast cancer
HB Engin, E Guney, O Keskin, B Oliva, A Gursoy
PloS one 8 (11), e81035, 2013
392013
A transcriptome-proteome integrated network identifies endoplasmic reticulum thiol oxidoreductase (ERp57) as a hub that mediates bone metastasis
N Santana-Codina, R Carretero, R Sanz-Pamplona, T Cabrera, E Guney, ...
Molecular & Cellular Proteomics 12 (8), 2111-2125, 2013
322013
GUILDify: a web server for phenotypic characterization of genes through biological data integration and network-based prioritization algorithms
E Guney, J Garcia-Garcia, B Oliva
Bioinformatics 30 (12), 1789-1790, 2014
312014
A diseasome cluster-based drug repurposing of soluble guanylate cyclase activators from smooth muscle relaxation to direct neuroprotection
F Langhauser, AI Casas, E Guney, J Menche, E Geuss, PWM Kleikers, ...
NPJ systems biology and applications 4 (1), 1-13, 2018
272018
FN14 and GRP94 expression are prognostic/predictive biomarkers of brain metastasis outcome that open up new therapeutic strategies
A Martínez-Aranda, V Hernández, E Guney, L Muixí, R Foj, N Baixeras, ...
Oncotarget 6 (42), 44254, 2015
272015
iFrag: a protein–protein interface prediction server based on sequence fragments
J Garcia-Garcia, V Valls-Comamala, E Guney, D Andreu, FJ Muńoz, ...
Journal of molecular biology 429 (3), 382-389, 2017
252017
Networks of Protein Protein Interactions: From Uncertainty to Molecular Details
J Garcia‐Garcia, J Bonet, E Guney, O Fornes, J Planas, B Oliva
Molecular Informatics 31 (5), 342-362, 2012
252012
Proximal pathway enrichment analysis for targeting comorbid diseases via network endopharmacology
J Aguirre-Plans, J Pińero, J Menche, F Sanz, LI Furlong, HHHW Schmidt, ...
Pharmaceuticals 11 (3), 61, 2018
232018
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Articles 1–20