Gungor Budak
Title
Cited by
Cited by
Year
Inferring causal molecular networks: empirical assessment through a community-based effort
SM Hill, LM Heiser, T Cokelaer, M Unger, NK Nesser, DE Carlin, Y Zhang, ...
Nature methods 13 (4), 310-318, 2016
1872016
Transcriptome analysis of developing lens reveals abundance of novel transcripts and extensive splicing alterations
R Srivastava, G Budak, S Dash, SA Lachke, SC Janga
Scientific reports 7 (1), 1-17, 2017
182017
Reconstruction of the temporal signaling network in Salmonella-infected human cells
G Budak, O Eren Ozsoy, Y Aydin Son, T Can, N Tuncbag
Frontiers in microbiology 6, 730, 2015
152015
precisionFDA Truth Challenge V2: Calling variants from short-and long-reads in difficult-to-map regions
ND Olson, J Wagner, J McDaniel, SH Stephens, ST Westreich, ...
Biorxiv, 2020.11. 13.380741, 2021
112021
Express: A database of transcriptome profiles encompassing known and novel transcripts across multiple development stages in eye tissues
G Budak, S Dash, R Srivastava, SA Lachke, SC Janga
Experimental eye research 168, 57-68, 2018
72018
Seten: a tool for systematic identification and comparison of processes, phenotypes, and diseases associated with RNA-binding proteins from condition-specific CLIP-seq profiles
G Budak, R Srivastava, SC Janga
RNA 23 (6), 836-846, 2017
72017
ExSurv: A web resource for prognostic analyses of exons across human cancers using clinical transcriptomes
S Hashemikhabir, G Budak, SC Janga
Cancer informatics 15, CIN. S39367, 2016
22016
Population-specific genome graphs improve high-throughput sequencing data analysis: A case study on the Pan-African genome
HS Tetikol, K Narci, D Turgut, G Budak, O Kalay, E Arslan, ...
bioRxiv, 2021
12021
M4B: A novel method for designing and ordering of the genetic devices
S Hashemikhabir, G Ersoy, G Oguz, B Yaldiz, Y Tuncel, G Budak, ...
2012 7th International Symposium on Health Informatics and Bioinformatics†…, 2012
12012
Identification of the Ischemic Pathway Level Changes by Integrating Temporal Phosphoproteome in Ovarian Cancer
G Budak, E Fraenkel, N TunÁbağ
null, 2017
2017
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Articles 1–10