| Antioxidant response elements: Discovery, classes, regulation and potential applications A Raghunath, K Sundarraj, R Nagarajan, F Arfuso, J Bian, AP Kumar, ... Redox biology 17, 297-314, 2018 | 390 | 2018 |
| High-throughput mapping of B cell receptor sequences to antigen specificity I Setliff, AR Shiakolas, KA Pilewski, AA Murji, RE Mapengo, K Janowska, ... Cell 179 (7), 1636-1646. e15, 2019 | 241 | 2019 |
| Multi-donor longitudinal antibody repertoire sequencing reveals the existence of public antibody clonotypes in HIV-1 infection I Setliff, WJ McDonnell, N Raju, RG Bombardi, AA Murji, C Scheepers, ... Cell host & microbe 23 (6), 845-854. e6, 2018 | 102 | 2018 |
| Virus-like particles identify an HIV V1V2 apex-binding neutralizing antibody that lacks a protruding loop EM Cale, J Gorman, NA Radakovich, ET Crooks, K Osawa, T Tong, J Li, ... Immunity 46 (5), 777-791. e10, 2017 | 84 | 2017 |
| Do we see what we should see? Describing non-covalent interactions in protein structures including precision M Gurusaran, M Shankar, R Nagarajan, JR Heliwell, k Sekar IUCrJ 1 (1), 74-81, 2014 | 64 | 2014 |
| Cross-reactive coronavirus antibodies with diverse epitope specificities and Fc effector functions AR Shiakolas, KJ Kramer, D Wrapp, SI Richardson, A Schäfer, S Wall, ... Cell Reports Medicine 2 (6), 2021 | 63 | 2021 |
| GAP: towards almost 100 percent prediction for β-strand-mediated aggregating peptides with distinct morphologies AM Thangakani, S Kumar, R Nagarajan, D Velmurugan, MM Gromiha Bioinformatics 30 (14), 1983-1990, 2014 | 59 | 2014 |
| Protein structural bioinformatics: an overview MM Gromiha, R Nagarajan, S Selvaraj Academic Press, 2019 | 56 | 2019 |
| Novel approach for selecting the best predictor for identifying the binding sites in DNA binding proteins R Nagarajan, A Shandar, M Gromiha, M Nucleic Acids Research 41 (16), 7606-7614, 2013 | 39 | 2013 |
| Single-cell profiling of the antigen-specific response to BNT162b2 SARS-CoV-2 RNA vaccine KJ Kramer, EM Wilfong, K Voss, SM Barone, AR Shiakolas, N Raju, ... Nature Communications 13 (1), 3466, 2022 | 37 | 2022 |
| CPAD, curated protein aggregation database: a repository of manually curated experimental data on protein and peptide aggregation AM Thangakani, R Nagarajan, S Kumar, R Sakthivel, D Velmurugan, ... PLoS One 11 (4), e0152949, 2016 | 37 | 2016 |
| Efficient discovery of SARS-CoV-2-neutralizing antibodies via B cell receptor sequencing and ligand blocking AR Shiakolas, KJ Kramer, NV Johnson, SC Wall, N Suryadevara, ... Nature biotechnology 40 (8), 1270-1275, 2022 | 35* | 2022 |
| Computational approaches for predicting the binding sites and understanding the recognition mechanism of protein-DNA complexes MM Gromiha, R Nagarajan Advances in protein chemistry and structural Biology, 65-99, 2013 | 35 | 2013 |
| PDBparam: online resource for computing structural parameters of proteins R Nagarajan, A Archana, AM Thangakani, S Jemimah, D Velmurugan, ... Bioinformatics and Biology insights 10, BBI. S38423, 2016 | 30 | 2016 |
| Potent neutralization of SARS-CoV-2 variants of concern by an antibody with an uncommon genetic signature and structural mode of spike recognition KJ Kramer, NV Johnson, AR Shiakolas, N Suryadevara, S Periasamy, ... Cell Reports 37 (1), 2021 | 24 | 2021 |
| Antibacterial photosensitization through activation of coproporphyrinogen oxidase MC Surdel, DJ Horvath Jr, LJ Lojek, AR Fullen, J Simpson, BF Dutter, ... Proceedings of the National Academy of Sciences 114 (32), E6652-E6659, 2017 | 23 | 2017 |
| Identification of compounds that inhibit the binding of Keap1a/Keap1b Kelch DGR domain with Nrf2 ETGE/DLG motifs in zebrafish A Raghunath, R Nagarajan, K Sundarraj, K Palanisamy, E Perumal Basic & Clinical Pharmacology & Toxicology 125 (3), 259-270, 2019 | 22 | 2019 |
| Prediction of RNA binding residues: An extensive analysis based on structure and function to select the best predictor R Nagarajan, MM Gromiha PLoS One 9 (3), e91140, 2014 | 21 | 2014 |
| Genome-wide identification and analysis of Nrf2 binding sites–Antioxidant response elements in zebrafish A Raghunath, R Nagarajan, K Sundarraj, L Panneerselvam, E Perumal Toxicology and Applied Pharmacology 360, 236-248, 2018 | 17 | 2018 |
| Structure based approach for understanding organism specific recognition of protein-RNA complexes R Nagarajan, SP Chothani, C Ramakrishnan, M Sekijima, MM Gromiha Biology Direct 10 (8), 1-13, 2015 | 15 | 2015 |
Ivelin GeorgievVanderbiltVerified email at vumc.org
