Amos Tanay
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Three-dimensional folding and functional organization principles of the Drosophila genome
T Sexton, E Yaffe, E Kenigsberg, F Bantignies, B Leblanc, M Hoichman, ...
Cell 148 (3), 458-472, 2012
Massively parallel single-cell RNA-seq for marker-free decomposition of tissues into cell types
DA Jaitin, E Kenigsberg, H Keren-Shaul, N Elefant, F Paul, I Zaretsky, ...
Science 343 (6172), 776-779, 2014
Single-cell Hi-C reveals cell-to-cell variability in chromosome structure
T Nagano, Y Lubling, TJ Stevens, S Schoenfelder, E Yaffe, W Dean, ...
Nature 502 (7469), 59-64, 2013
Discovering statistically significant biclusters in gene expression data
A Tanay, R Sharan, R Shamir
Bioinformatics 18 (suppl_1), S136-S144, 2002
Derivation of novel human ground state naive pluripotent stem cells
O Gafni, L Weinberger, AAF Mansour, YS Manor, E Chomsky, ...
Nature 504 (7479), 282-286, 2013
Transcriptional heterogeneity and lineage commitment in myeloid progenitors
F Paul, Y Arkin, A Giladi, DA Jaitin, E Kenigsberg, H Keren-Shaul, ...
Cell 163 (7), 1663-1677, 2015
Quantification of protein half-lives in the budding yeast proteome
A Belle, A Tanay, L Bitincka, R Shamir, EK O’Shea
Proceedings of the National Academy of Sciences 103 (35), 13004-13009, 2006
Multiscale 3D genome rewiring during mouse neural development
B Bonev, NM Cohen, Q Szabo, L Fritsch, GL Papadopoulos, Y Lubling, ...
Cell 171 (3), 557-572. e24, 2017
Probabilistic modeling of Hi-C contact maps eliminates systematic biases to characterize global chromosomal architecture
E Yaffe, A Tanay
Nature genetics 43 (11), 1059-1065, 2011
Deterministic direct reprogramming of somatic cells to pluripotency
Y Rais, A Zviran, S Geula, O Gafni, E Chomsky, S Viukov, AAF Mansour, ...
Nature 502 (7469), 65-70, 2013
Comparative Hi-C reveals that CTCF underlies evolution of chromosomal domain architecture
MV Rudan, C Barrington, S Henderson, C Ernst, DT Odom, A Tanay, ...
Cell reports 10 (8), 1297-1309, 2015
Revealing modularity and organization in the yeast molecular network by integrated analysis of highly heterogeneous genomewide data
A Tanay, R Sharan, M Kupiec, R Shamir
Proceedings of the National Academy of Sciences 101 (9), 2981-2986, 2004
Cell-cycle dynamics of chromosomal organization at single-cell resolution
T Nagano, Y Lubling, C Várnai, C Dudley, W Leung, Y Baran, NM Cohen, ...
Nature 547 (7661), 61-67, 2017
Scaling single-cell genomics from phenomenology to mechanism
A Tanay, A Regev
Nature 541 (7637), 331-338, 2017
Dissecting immune circuits by linking CRISPR-pooled screens with single-cell RNA-seq
DA Jaitin, A Weiner, I Yofe, D Lara-Astiaso, H Keren-Shaul, E David, ...
Cell 167 (7), 1883-1896. e15, 2016
Prediction of acute myeloid leukaemia risk in healthy individuals
S Abelson, G Collord, SWK Ng, O Weissbrod, NM Cohen, E Niemeyer, ...
Nature 559 (7714), 400-404, 2018
Cohesin‐mediated interactions organize chromosomal domain architecture
S Sofueva, E Yaffe, WC Chan, D Georgopoulou, M Vietri Rudan, ...
The EMBO journal 32 (24), 3119-3129, 2013
Frequent switching of Polycomb repressive marks and DNA hypermethylation in the PC3 prostate cancer cell line
EN Gal-Yam, G Egger, L Iniguez, H Holster, S Einarsson, X Zhang, JC Lin, ...
Proceedings of the National Academy of Sciences 105 (35), 12979-12984, 2008
Robust 4C-seq data analysis to screen for regulatory DNA interactions
HJG Van De Werken, G Landan, SJB Holwerda, M Hoichman, P Klous, ...
Nature methods 9 (10), 969-972, 2012
EXPANDER–an integrative program suite for microarray data analysis
R Shamir, A Maron-Katz, A Tanay, C Linhart, I Steinfeld, R Sharan, ...
BMC bioinformatics 6 (1), 1-12, 2005
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