| CAVER 3.0: a tool for the analysis of transport pathways in dynamic protein structures E Chovancova, A Pavelka, P Benes, O Strnad, J Brezovsky, B Kozlikova, ... Public Library of Science 8 (10), e1002708, 2012 | 912 | 2012 |
| CAVER Analyst 2.0: analysis and visualization of channels and tunnels in protein structures and molecular dynamics trajectories A Jurcik, D Bednar, J Byska, SM Marques, K Furmanova, L Daniel, ... Bioinformatics 34 (20), 3586-3588, 2018 | 182 | 2018 |
| CAVER Analyst 1.0: graphic tool for interactive visualization and analysis of tunnels and channels in protein structures B Kozlikova, E Sebestova, V Sustr, J Brezovsky, O Strnad, L Daniel, ... Bioinformatics 30 (18), 2684-2685, 2014 | 149 | 2014 |
| Visualization of biomolecular structures: State of the art revisited B Kozlíková, M Krone, M Falk, N Lindow, M Baaden, D Baum, I Viola, ... Computer Graphics Forum 36 (8), 178-204, 2017 | 102 | 2017 |
| CAVER: algorithms for analyzing dynamics of tunnels in macromolecules A Pavelka, E Sebestova, B Kozlikova, J Brezovsky, J Sochor, ... IEEE/ACM transactions on computational biology and bioinformatics 13 (3 …, 2015 | 98 | 2015 |
| Visual analysis of biomolecular cavities: State of the art M Krone, B Kozlíková, N Lindow, M Baaden, D Baum, J Parulek, HC Hege, ... Computer Graphics Forum 35 (3), 527-551, 2016 | 65 | 2016 |
| Visualization of biomolecular structures: State of the art B Kozlikova, M Krone, M Falk, N Lindow, M Baaden, D Baum, I Viola, ... | 37 | 2015 |
| Instant construction and visualization of crowded biological environments T Klein, L Autin, B Kozlikova, DS Goodsell, A Olson, ME Gröller, I Viola IEEE transactions on visualization and computer graphics 24 (1), 862-872, 2017 | 35 | 2017 |
| Multiscale molecular visualization H Miao, T Klein, D Kouřil, P Mindek, K Schatz, ME Gröller, B Kozlíková, ... Journal of molecular biology 431 (6), 1049-1070, 2019 | 30 | 2019 |
| MoleCollar and tunnel heat map visualizations for conveying spatio‐temporo‐chemical properties across and along protein voids J Byška, A Jurčík, ME Gröller, I Viola, B Kozlikova Computer Graphics Forum 34 (3), 1-10, 2015 | 29 | 2015 |
| AnimoAminoMiner: Exploration of protein tunnels and their properties in molecular dynamics J Byška, M Le Muzic, ME Gröller, I Viola, B Kozlikova IEEE transactions on visualization and computer graphics 22 (1), 747-756, 2015 | 26 | 2015 |
| Labels on levels: Labeling of multi-scale multi-instance and crowded 3D biological environments D Kouřil, L Čmolík, B Kozlíková, HY Wu, G Johnson, DS Goodsell, ... IEEE transactions on visualization and computer graphics 25 (1), 977-986, 2018 | 21 | 2018 |
| Computational analysis of protein tunnels and channels J Brezovsky, B Kozlikova, J Damborsky Protein Engineering, 25-42, 2018 | 21 | 2018 |
| Human-computer interaction in real-3D and Pseudo-3D cartographic visualization: A comparative study K Špriňarová, V Juřík, Č Šašinka, L Herman, Z Štěrba, Z Stachoň, ... Cartography-Maps Connecting the World, 59-73, 2015 | 19 | 2015 |
| Interactive exploration of ligand transportation through protein tunnels K Furmanová, M Jarešová, J Byška, A Jurčík, J Parulek, H Hauser, ... BMC bioinformatics 18 (2), 1-16, 2017 | 18 | 2017 |
| COZOID: contact zone identifier for visual analysis of protein-protein interactions K Furmanová, J Byška, EM Gröller, I Viola, JJ Paleček, B Kozlíková BMC bioinformatics 19 (1), 1-17, 2018 | 15 | 2018 |
| Visualization of large molecular trajectories D Duran, P Hermosilla, T Ropinski, B Kozlikova, A Vinacua, PP Vázquez IEEE Transactions on Visualization and Computer Graphics 25 (1), 987-996, 2018 | 15 | 2018 |
| Forensic 3D facial identication software (FIDENTIS) I Chalás, P Urbanová, Z Kotulanová, M Jandová, M Králík, B Kozlíková, ... | 15 | 2014 |
| Tunnel detection in protein structures using sampling-based motion planning V Vonásek, B Kozlíková 2017 11th International Workshop on Robot Motion and Control (RoMoCo), 185-192, 2017 | 14 | 2017 |
| Accelerated visualization of transparent molecular surfaces in molecular dynamics A Jurčík, J Parulek, J Sochor, B Kozlikova 2016 IEEE Pacific Visualization Symposium (PacificVis), 112-119, 2016 | 14 | 2016 |
Jiri SochorProfessor Emeritus, Faculty of Informatics, Masaryk UniversityVerified email at fi.muni.cz
